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- pubmed-bibtex
- =============
- .. image:: https://github.com/fphammerle/pubmed-bibtex/workflows/tests/badge.svg
- :target: https://github.com/fphammerle/pubmed-bibtex/actions
- .. image:: https://coveralls.io/repos/github/fphammerle/pubmed-bibtex/badge.svg?branch=master
- :target: https://coveralls.io/github/fphammerle/pubmed-bibtex?branch=master
- .. image:: https://img.shields.io/pypi/v/pubmed-bibtex.svg
- :target: https://pypi.org/project/pubmed-bibtex/#history
- .. image:: https://img.shields.io/pypi/pyversions/pubmed-bibtex.svg
- :target: https://pypi.org/project/pubmed-bibtex/
- Python Script & Module to Generate BibTeX Entries for PubMed
- Publications
- Utilizes the API of TeXMed, a BibTeX interface for PubMed.
- TeXMed was written by Arne Muller https://www.bioinformatics.org/texmed/
- Install
- -------
- .. code:: sh
- pip3 install --user pubmed-bibtex
- Usage
- -----
- .. code:: sh
- $ pubmed-bibtex 31025164
- @Article{pmid31025164,
- Author="...",
- Title="...",
- Journal="...",
- ...
- }
- or
- .. code:: python
- from pubmed_bibtex import bibtex_entry_from_pmid
- print(bibtex_entry_from_pmid(123456789))
- Tests
- -----
- .. code:: sh
- pip3 install --user pipenv
- git clone https://github.com/fphammerle/pubmed-bibtex.git
- cd pubmed-bibtex
- pipenv run pylint freesurfer_surface
- pipenv run pytest --cov=freesurfer_surface
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