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- import os
- import setuptools
- with open("README.rst", "r") as readme:
- LONG_DESCRIPTION = readme.read()
- setuptools.setup(
- name="freesurfer-volume-reader",
- use_scm_version={
- "write_to": os.path.join("freesurfer_volume_reader", "version.py"),
- # `version` triggers pylint C0103
- # 2 newlines after import & 2 spaces before # for black
- "write_to_template": "# pylint: disable=missing-module-docstring\nimport typing\n\n"
- + '__version__: typing.Optional[str] = "{version}"\n',
- },
- description="Python script & library to read hippocampal subfield volumes"
- "computed by Freesurfer & ASHS",
- long_description=LONG_DESCRIPTION,
- author="Fabian Peter Hammerle",
- author_email="fabian@hammerle.me",
- url="https://github.com/fphammerle/freesurfer-volume-reader",
- # TODO add license
- keywords=[
- "brain",
- "freesurfer",
- "hippocampus",
- "neuroimaging",
- "reader",
- "subfields",
- ],
- classifiers=[
- "Development Status :: 3 - Alpha",
- "Intended Audience :: Healthcare Industry",
- "Intended Audience :: Science/Research",
- "Programming Language :: Python :: 3.7",
- "Programming Language :: Python :: 3.8",
- "Programming Language :: Python :: 3.9",
- "Programming Language :: Python :: 3.10",
- "Topic :: Scientific/Engineering :: Information Analysis",
- "Topic :: Scientific/Engineering :: Medical Science Apps.",
- "Topic :: Utilities",
- ],
- packages=setuptools.find_packages(),
- entry_points={
- "console_scripts": [
- "freesurfer-volume-reader = freesurfer_volume_reader.__main__:main"
- ]
- },
- python_requires=">=3.7", # python<3.7 untested
- install_requires=[
- # >=0.21.0 pandas.DataFrame.drop(columns=[...], ...)
- # <0.23 untested
- "pandas>=0.23.0,<2"
- ],
- setup_requires=["setuptools_scm"],
- tests_require=["pytest<5", "pytest-timeout<2"],
- )
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