# pylint: disable=missing-module-docstring import pytest from freesurfer_volume_reader import ( SubfieldVolumeFile, VolumeFile, __version__, parse_version_string, remove_group_names_from_regex, ) def test_module_version(): assert len(__version__) >= len("0.1.0") @pytest.mark.filterwarnings("ignore:function `parse_version_string` is deprecated") @pytest.mark.parametrize( ("version_string", "expected_tuple"), [ ("0.24.2", (0, 24, 2)), ("0.21.0", (0, 21, 0)), ("0.2.2.dev28+g526f05c.d20190504", (0, 2, 2, "dev28+g526f05c", "d20190504")), ], ) def test_parse_version_string(version_string, expected_tuple): assert expected_tuple == parse_version_string(version_string) @pytest.mark.filterwarnings("ignore:function `parse_version_string` is deprecated") def test_parse_version_string_comparison(): assert parse_version_string("0.24.2") == (0, 24, 2) assert parse_version_string("0.24.2") < (0, 25) assert parse_version_string("0.24.2") < (0, 24, 3) assert parse_version_string("0.24.2") <= (0, 24, 2) assert parse_version_string("0.24.2") >= (0, 24, 2) assert parse_version_string("0.24.2") > (0, 24, 1) assert parse_version_string("0.24.2") > (0, 24) assert parse_version_string("0.2.2.dev28+g526f05c.d20190504") > (0, 2, 2) assert parse_version_string("0.2.2.dev28+g526f05c.d20190504") < (0, 2, 3) @pytest.mark.parametrize( ("source_pattern", "expected_pattern"), [ (r"^(?P[lr])h\.hippoSfVolumes", r"^([lr])h\.hippoSfVolumes"), (r"(?Pa(?Pb))", r"(a(b))"), ], ) def test_remove_group_names_from_regex(source_pattern, expected_pattern): assert expected_pattern == remove_group_names_from_regex( regex_pattern=source_pattern ) def test_volume_file_abstract(): with pytest.raises( TypeError, match=r"^Can't instantiate abstract class VolumeFile with abstract methods? __init__$", ): VolumeFile(path="/tmp/test") # pylint: disable=abstract-class-instantiated class DummyVolumeFile(VolumeFile): # pylint: disable=useless-super-delegation def __init__(self, path: str) -> None: super().__init__(path=path) class DummySubfieldVolumeFile(SubfieldVolumeFile): # pylint: disable=useless-super-delegation def __init__(self, path: str) -> None: super().__init__(path=path) def read_volumes_mm3(self): return super().read_volumes_mm3() def read_volumes_dataframe(self): return super().read_volumes_dataframe() def test_subfield_volume_file_abstractmethod(): volume_file = DummySubfieldVolumeFile(path="subfield-dummy") with pytest.raises(NotImplementedError): volume_file.read_volumes_mm3() with pytest.raises(NotImplementedError): volume_file.read_volumes_dataframe()