Commit History

Author SHA1 Message Date
  Fabian Peter Hammerle 526f05c29c readme: fixed link list formatting 5 years ago
  Fabian Peter Hammerle 189dd5303c script: added param --source-types to optionally enable collection of ASHS volumes files; added column `source_type` 5 years ago
  Fabian Peter Hammerle f7b5c8b5f1 move remove_group_names_from_regex() to __init__.py 5 years ago
  Fabian Peter Hammerle 7ca94fde34 Merge branch 'ashs' of github.com:fphammerle/freesurfer-volume-reader 5 years ago
  Fabian Peter Hammerle 0635281aa4 refactor examples/barplot.py 5 years ago
  Fabian Peter Hammerle 10d0a331af refactor examples/barplot.py: adapt variable names to fix pylint warnings 5 years ago
  Fabian Peter Hammerle 2e4132c892 adapt dummy test data to fix indeterministically failing test 5 years ago
  Fabian Peter Hammerle 898d71570b extend docstring sample: chain Freesurfer & ASHS find() iterator 5 years ago
  Fabian Peter Hammerle 7781e8eda3 fix VolumeFile type hint for python<3.7 5 years ago
  Fabian Peter Hammerle 3915914774 fix VolumeFile.find() return type hint 5 years ago
  Fabian Peter Hammerle 5f546743fc added ashs.HippocampalSubfieldsVolumeFile.read_volumes_dataframe() 5 years ago
  Fabian Peter Hammerle fcf2db74f4 added sample code using ashs.HippocampalSubfieldsVolumeFile.find() 5 years ago
  Fabian Peter Hammerle a0c0d5b52f moved freesurfer.HippocampalSubfieldsVolumeFile.find() to VolumeFile.find() 5 years ago
  Fabian Peter Hammerle 0ca4226d54 added ashs.HippocampalSubfieldsVolumeFile.read_volumes_mm3() 5 years ago
  Fabian Peter Hammerle 111c081c3a added abstract class VolumeFile 5 years ago
  Fabian Peter Hammerle 5eb2727163 fix pylint similarity warning 5 years ago
  Fabian Peter Hammerle 276b501c93 split __main__.py from __init__.py 5 years ago
  Fabian Peter Hammerle 1d9c516b63 added ashs.HippocampalSubfieldsVolumeFile.__init__: parses an ASHS *volumes.txt filename 5 years ago
  Fabian Peter Hammerle a2429f0481 refactor tests: import assert_volume_frames_equal instead of using fixture 5 years ago
  Fabian Peter Hammerle c9f4d33298 refactor tests: shared SUBJECTS_DIR across test modules 5 years ago
  Fabian Peter Hammerle 4e994c2b0b refactor: move pytest conftest.py to tests/ 5 years ago
  Fabian Peter Hammerle 0cb4c0141e add python code sample to module docstrings 5 years ago
  Fabian Peter Hammerle 8bfbe75024 move/rename read_hippocampal_volume_file_dataframe -> freesurfer.HippocampalSubfieldsVolumeFile.read_volumes_dataframe() 5 years ago
  Fabian Peter Hammerle 55049efc5c rename/move read_hippocampal_volumes_mm3 -> freesurfer.HippocampalSubfieldsVolumeFile.read_volumes_mm3() 5 years ago
  Fabian Peter Hammerle c2c741e339 move/rename parse_hippocampal_volume_file_path() -> freesurfer.HippocampalSubfieldsVolumeFile.__init__() 5 years ago
  Fabian Peter Hammerle 124f351260 rename class freesurfer.FreesurferHippocampalVolumeFile -> freesurfer.HippocampalSubfieldsVolumeFile 5 years ago
  Fabian Peter Hammerle da56fb510e move/rename find_hippocampal_volume_files() to freesurfer.FreesurferHippocampalVolumeFile.find() 5 years ago
  Fabian Peter Hammerle 5af1308d8e git ignore build/ & dist/ 5 years ago
  Fabian Peter Hammerle f00fbdee19 setup.py: fix description (1 line only), added long description 5 years ago
  Fabian Peter Hammerle 4b18fcbf42 set pandas version constraint 5 years ago