 Fabian Peter Hammerle
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4b7481f697
version.py: rename version string variable `version` -> `__version__` to fix pylint C0103
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vor 5 Jahren |
 Fabian Peter Hammerle
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8f17ceb2b7
fix failure of module setup due to version.py not being available yet
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vor 5 Jahren |
|
Fabian Peter Hammerle
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06250eee7c
script: added flag `--version`
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vor 5 Jahren |
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Fabian Peter Hammerle
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904501c765
set module version string via setuptools_scm's `write_to` option
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vor 5 Jahren |
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Fabian Peter Hammerle
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eb9058a5c6
readme: added note on semantic versioning of releases
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vor 5 Jahren |
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Fabian Peter Hammerle
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863bbde9ed
set upper version constraint for dependencies to prevent unexpected breaking changes
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vor 5 Jahren |
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Fabian Peter Hammerle
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88a2a730e0
script: added param --source-types to optionally enable collection of ASHS volumes files
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vor 5 Jahren |
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Fabian Peter Hammerle
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8df9dbc392
fix failing coverage check due to pandas.concat() version branch
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vor 5 Jahren |
|
Fabian Peter Hammerle
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1d0891eced
Merge branch 'master' into ashs-script
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vor 5 Jahren |
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Fabian Peter Hammerle
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bd4f82e4bb
travis-ci: require test coverage of 100%
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vor 5 Jahren |
|
Fabian Peter Hammerle
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2118f68b20
refactor main: lambda find_volume_files
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vor 5 Jahren |
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Fabian Peter Hammerle
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a7044df8ae
readme: fix --source-types arg
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vor 5 Jahren |
|
Fabian Peter Hammerle
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6b2c883982
coverage: enable branch management
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vor 5 Jahren |
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Fabian Peter Hammerle
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0a098ce5d1
travis-ci: fail if coverage < 100%
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vor 5 Jahren |
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Fabian Peter Hammerle
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0d6cacdd34
Revert "configure pytest to always create coverage report"
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vor 5 Jahren |
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Fabian Peter Hammerle
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a581e5aad7
test abstract VolumeFile.* to increase coverage
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vor 5 Jahren |
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Fabian Peter Hammerle
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d69fc4ae7b
fix pylint ignore unexpected-keyword-arg instruction (pandas<0.23)
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vor 5 Jahren |
|
Fabian Peter Hammerle
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1abafc1ed8
test `python -m` module call to increase coverage
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vor 5 Jahren |
|
Fabian Peter Hammerle
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3af0d701e7
setup.py: added missing pytest-cov dependency
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vor 5 Jahren |
|
Fabian Peter Hammerle
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3f6dc3ba53
configure pytest to always create coverage report
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vor 5 Jahren |
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Fabian Peter Hammerle
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43f43f806c
git ignore coverage data
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vor 5 Jahren |
|
Fabian Peter Hammerle
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88ea8b6f10
adapt ASHS bert dummy test data to fix tests failing inadvertently due different order of rows in frame
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vor 5 Jahren |
|
Fabian Peter Hammerle
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6f0484ee66
ignore pylint unexpected-keyword-arg for pandas<0.23
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vor 5 Jahren |
|
Fabian Peter Hammerle
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b667c9bd79
travis-ci: configure pytest to create coverage report
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vor 5 Jahren |
|
Fabian Peter Hammerle
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8bf88df3f6
test data: round volumes in subjects/all-hippocampal-volumes.csv to match precision in other csv files
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vor 5 Jahren |
|
Fabian Peter Hammerle
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c6ed274451
adapt ASHS bert dummy test data to fix tests failing inadvertently due different order of rows in frame
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vor 5 Jahren |
|
Fabian Peter Hammerle
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0bd50096fc
rename source type: `freesurfer` -> `freesurfer-hipposf`
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vor 5 Jahren |
|
Fabian Peter Hammerle
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65e9d507cd
adapt ASHS dummy test data to fix tests failing inadvertently due different order of rows in frame
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vor 5 Jahren |
|
Fabian Peter Hammerle
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2c7299438e
integration test against specifying both --ashs-filename-regex & --freesurfer-filename-regex
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vor 5 Jahren |
|
Fabian Peter Hammerle
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bf7feb5ba0
restore compatibility with pandas<0.23
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vor 5 Jahren |
