test against python3.10

.github/workflows/python.yml

@@ -37,6 +37,7 @@ jobs:
         - '3.7'
         - '3.8'
         - '3.9'
+        - '3.10'
       fail-fast: false
     steps:
     - uses: actions/checkout@v2.4.0
@@ -71,6 +72,7 @@ jobs:
         - '3.7'
         - '3.8'
         - '3.9'
+        - '3.10'
       fail-fast: false
     defaults:
       run:

Pipfile

@@ -6,17 +6,25 @@ name = "pypi"
 [packages]
 freesurfer-surface = {editable = true, path = "."}
 
-# python3.6 compatibility
-numpy = "<1.20"
+# python3.7 compatibility
+numpy = "<1.22"
 
 [dev-packages]
-black = "==20.8b1"
+black = "==21.12b0"
 mypy = "*"
 pylint = "*"
 pylint-import-requirements = "*"
 pytest = "*"
 pytest-cov = "*"
 
+# python3.10 compatibility
+# >   File "[...]/lib/python3.10/site-packages/mypy/main.py", line 11, in <module>
+# >     from typing_extensions import Final, NoReturn
+# > ModuleNotFoundError: No module named 'typing_extensions'
+typing-extensions = {markers = ""}
+# mypy on python<3.8
+typed-ast = {markers = "python_version < '3.8'"}
+
 [requires]
 python_version = "3"
 

Pipfile.lock

@@ -1,7 +1,7 @@
 {
     "_meta": {
         "hash": {
-            "sha256": "da05d7454444e1cb1235c01a412be1d4cc32bd6f5ca2ad23bfe1e399d95b38ca"
+            "sha256": "d3567ee22b8278a7d3b5321f52d320d5e3862748b46028a00a61bcdab7f1d6e7"
         },
         "pipfile-spec": 6,
         "requires": {
@@ -22,137 +22,129 @@
         },
         "numpy": {
             "hashes": [
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+                "sha256:b545ebadaa2b878c8630e5bcdb97fc4096e779f335fc0f943547c1c91540c815",
+                "sha256:c293d3c0321996cd8ffe84215ffe5d269fd9d1d12c6f4ffe2b597a7c30d3e593",
+                "sha256:c5562bcc1a9b61960fc8950ade44d00e3de28f891af0acc96307c73613d18f6e",
+                "sha256:ca9c23848292c6fe0a19d212790e62f398fd9609aaa838859be8459bfbe558aa",
+                "sha256:cc1b30205d138d1005adb52087ff45708febbef0e420386f58664f984ef56954",
+                "sha256:dbce7adeb66b895c6aaa1fad796aaefc299ced597f6fbd9ceddb0dd735245354",
+                "sha256:dc4b2fb01f1b4ddbe2453468ea0719f4dbb1f5caa712c8b21bb3dd1480cd30d9",
+                "sha256:eed2afaa97ec33b4411995be12f8bdb95c87984eaa28d76cf628970c8a2d689a",
+                "sha256:fc7a7d7b0ed72589fd8b8486b9b42a564f10b8762be8bd4d9df94b807af4a089"
             ],
             "index": "pypi",
-            "version": "==1.19.5"
-        },
-        "sanitized-package": {
-            "editable": true,
-            "path": "."
+            "version": "==1.21.5"
         }
     },
     "develop": {
-        "appdirs": {
-            "hashes": [
-                "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41",
-                "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"
-            ],
-            "version": "==1.4.4"
-        },
         "astroid": {
             "hashes": [
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-                "sha256:9eaeaf92b3e21b70bec1a262e7eb118d2e96294892a5de595c92a12adc80dfc2"
+                "sha256:1efdf4e867d4d8ba4a9f6cf9ce07cd182c4c41de77f23814feb27ca93ca9d877",
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             ],
-            "markers": "python_version ~= '3.6'",
-            "version": "==2.8.2"
+            "version": "==2.9.3"
         },
         "attrs": {
             "hashes": [
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-                "sha256:ef6aaac3ca6cd92904cdd0d83f629a15f18053ec84e6432106f7a4d04ae4f5fb"
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             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
-            "version": "==21.2.0"
+            "version": "==21.4.0"
         },
         "black": {
             "hashes": [
-                "sha256:1c02557aa099101b9d21496f8a914e9ed2222ef70336404eeeac8edba836fbea"
+                "sha256:77b80f693a569e2e527958459634f18df9b0ba2625ba4e0c2d5da5be42e6f2b3",
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             ],
             "index": "pypi",
-            "version": "==20.8b1"
+            "version": "==21.12b0"
         },
         "click": {
             "hashes": [
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-                "sha256:7027bc7bbafaab8b2c2816861d8eb372429ee3c02e193fc2f93d6c4ab9de49c5"
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             ],
-            "markers": "python_version >= '3.6'",
-            "version": "==8.0.2"
+            "version": "==8.0.3"
         },
         "coverage": {
-            "extras": [
-                "toml"
-            ],
             "hashes": [
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-            "version": "==4.8.1"
+            "version": "==4.10.0"
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         "iniconfig": {
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@@ -163,39 +155,52 @@
         },
         "isort": {
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-            "version": "==5.9.3"
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-            "version": "==1.6.0"
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@@ -206,32 +211,29 @@
         },
         "mypy": {
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-            "version": "==0.910"
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         "mypy-extensions": {
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@@ -242,11 +244,10 @@
         },
         "packaging": {
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-            "version": "==21.0"
+            "version": "==21.3"
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         "pathspec": {
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@@ -257,35 +258,32 @@
         },
         "platformdirs": {
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-            "markers": "python_version >= '3.6'",
-            "version": "==2.4.0"
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-            "version": "==1.10.0"
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         "pylint": {
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-                "sha256:2c9843fff1a88ca0ad98a256806c82c5a8f86086e7ccbdb93297d86c3f90c436"
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@@ -297,11 +295,10 @@
         },
         "pyparsing": {
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-            "version": "==2.4.7"
+            "version": "==3.0.6"
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         "pytest": {
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@@ -319,124 +316,116 @@
             "index": "pypi",
             "version": "==3.0.0"
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-        "regex": {
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-                "sha256:09e1031e2059abd91177c302da392a7b6859ceda038be9e015b522a182c89e4f",
-                "sha256:176796cb7f82a7098b0c436d6daac82f57b9101bb17b8e8119c36eecf06a60a3",
-                "sha256:1abbd95cbe9e2467cac65c77b6abd9223df717c7ae91a628502de67c73bf6838",
-                "sha256:1ce02f420a7ec3b2480fe6746d756530f69769292eca363218c2291d0b116a01",
-                "sha256:1f51926db492440e66c89cd2be042f2396cf91e5b05383acd7372b8cb7da373f",
-                "sha256:26895d7c9bbda5c52b3635ce5991caa90fbb1ddfac9c9ff1c7ce505e2282fb2a",
-                "sha256:2efd47704bbb016136fe34dfb74c805b1ef5c7313aef3ce6dcb5ff844299f432",
-                "sha256:36c98b013273e9da5790ff6002ab326e3f81072b4616fd95f06c8fa733d2745f",
-                "sha256:39079ebf54156be6e6902f5c70c078f453350616cfe7bfd2dd15bdb3eac20ccc",
-                "sha256:3d52c5e089edbdb6083391faffbe70329b804652a53c2fdca3533e99ab0580d9",
-                "sha256:45cb0f7ff782ef51bc79e227a87e4e8f24bc68192f8de4f18aae60b1d60bc152",
-                "sha256:4786dae85c1f0624ac77cb3813ed99267c9adb72e59fdc7297e1cf4d6036d493",
-                "sha256:51feefd58ac38eb91a21921b047da8644155e5678e9066af7bcb30ee0dca7361",
-                "sha256:55ef044899706c10bc0aa052f2fc2e58551e2510694d6aae13f37c50f3f6ff61",
-                "sha256:5e5796d2f36d3c48875514c5cd9e4325a1ca172fc6c78b469faa8ddd3d770593",
-                "sha256:5f199419a81c1016e0560c39773c12f0bd924c37715bffc64b97140d2c314354",
-                "sha256:5f55c4804797ef7381518e683249310f7f9646da271b71cb6b3552416c7894ee",
-                "sha256:74e55f8d66f1b41d44bc44c891bcf2c7fad252f8f323ee86fba99d71fd1ad5e3",
-                "sha256:7f125fce0a0ae4fd5c3388d369d7a7d78f185f904c90dd235f7ecf8fe13fa741",
-                "sha256:82cfb97a36b1a53de32b642482c6c46b6ce80803854445e19bc49993655ebf3b",
-                "sha256:88dc3c1acd3f0ecfde5f95c32fcb9beda709dbdf5012acdcf66acbc4794468eb",
-                "sha256:924079d5590979c0e961681507eb1773a142553564ccae18d36f1de7324e71ca",
-                "sha256:973499dac63625a5ef9dfa4c791aa33a502ddb7615d992bdc89cf2cc2285daa3",
-                "sha256:981c786293a3115bc14c103086ae54e5ee50ca57f4c02ce7cf1b60318d1e8072",
-                "sha256:9c070d5895ac6aeb665bd3cd79f673775caf8d33a0b569e98ac434617ecea57d",
-                "sha256:9e3e2cea8f1993f476a6833ef157f5d9e8c75a59a8d8b0395a9a6887a097243b",
-                "sha256:9e527ab1c4c7cf2643d93406c04e1d289a9d12966529381ce8163c4d2abe4faf",
-                "sha256:a37305eb3199d8f0d8125ec2fb143ba94ff6d6d92554c4b8d4a8435795a6eccd",
-                "sha256:aa0ab3530a279a3b7f50f852f1bab41bc304f098350b03e30a3876b7dd89840e",
-                "sha256:b04e512eb628ea82ed86eb31c0f7fc6842b46bf2601b66b1356a7008327f7700",
-                "sha256:b09d3904bf312d11308d9a2867427479d277365b1617e48ad09696fa7dfcdf59",
-                "sha256:b8b6ee6555b6fbae578f1468b3f685cdfe7940a65675611365a7ea1f8d724991",
-                "sha256:b9b5c215f3870aa9b011c00daeb7be7e1ae4ecd628e9beb6d7e6107e07d81287",
-                "sha256:c6569ba7b948c3d61d27f04e2b08ebee24fec9ff8e9ea154d8d1e975b175bfa7",
-                "sha256:e4204708fa116dd03436a337e8e84261bc8051d058221ec63535c9403a1582a1",
-                "sha256:ea8de658d7db5987b11097445f2b1f134400e2232cb40e614e5f7b6f5428710e",
-                "sha256:f540f153c4f5617bc4ba6433534f8916d96366a08797cbbe4132c37b70403e92",
-                "sha256:fab3ab8aedfb443abb36729410403f0fe7f60ad860c19a979d47fb3eb98ef820",
-                "sha256:fb2baff66b7d2267e07ef71e17d01283b55b3cc51a81b54cc385e721ae172ba4",
-                "sha256:fe6ce4f3d3c48f9f402da1ceb571548133d3322003ce01b20d960a82251695d2",
-                "sha256:ff24897f6b2001c38a805d53b6ae72267025878d35ea225aa24675fbff2dba7f"
-            ],
-            "version": "==2021.10.8"
-        },
         "toml": {
             "hashes": [
                 "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b",
                 "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==0.10.2"
         },
         "tomli": {
             "hashes": [
-                "sha256:8dd0e9524d6f386271a36b41dbf6c57d8e32fd96fd22b6584679dc569d20899f",
-                "sha256:a5b75cb6f3968abb47af1b40c1819dc519ea82bcc065776a866e8d74c5ca9442"
+                "sha256:05b6166bff487dc068d322585c7ea4ef78deed501cc124060e0f238e89a9231f",
+                "sha256:e3069e4be3ead9668e21cb9b074cd948f7b3113fd9c8bba083f48247aab8b11c"
             ],
-            "version": "==1.2.1"
+            "version": "==1.2.3"
         },
         "typed-ast": {
             "hashes": [
-                "sha256:01ae5f73431d21eead5015997ab41afa53aa1fbe252f9da060be5dad2c730ace",
-                "sha256:067a74454df670dcaa4e59349a2e5c81e567d8d65458d480a5b3dfecec08c5ff",
-                "sha256:0fb71b8c643187d7492c1f8352f2c15b4c4af3f6338f21681d3681b3dc31a266",
-                "sha256:1b3ead4a96c9101bef08f9f7d1217c096f31667617b58de957f690c92378b528",
-                "sha256:2068531575a125b87a41802130fa7e29f26c09a2833fea68d9a40cf33902eba6",
-                "sha256:209596a4ec71d990d71d5e0d312ac935d86930e6eecff6ccc7007fe54d703808",
-                "sha256:2c726c276d09fc5c414693a2de063f521052d9ea7c240ce553316f70656c84d4",
-                "sha256:398e44cd480f4d2b7ee8d98385ca104e35c81525dd98c519acff1b79bdaac363",
-                "sha256:52b1eb8c83f178ab787f3a4283f68258525f8d70f778a2f6dd54d3b5e5fb4341",
-                "sha256:5feca99c17af94057417d744607b82dd0a664fd5e4ca98061480fd8b14b18d04",
-                "sha256:7538e495704e2ccda9b234b82423a4038f324f3a10c43bc088a1636180f11a41",
-                "sha256:760ad187b1041a154f0e4d0f6aae3e40fdb51d6de16e5c99aedadd9246450e9e",
-                "sha256:777a26c84bea6cd934422ac2e3b78863a37017618b6e5c08f92ef69853e765d3",
-                "sha256:95431a26309a21874005845c21118c83991c63ea800dd44843e42a916aec5899",
-                "sha256:9ad2c92ec681e02baf81fdfa056fe0d818645efa9af1f1cd5fd6f1bd2bdfd805",
-                "sha256:9c6d1a54552b5330bc657b7ef0eae25d00ba7ffe85d9ea8ae6540d2197a3788c",
-                "sha256:aee0c1256be6c07bd3e1263ff920c325b59849dc95392a05f258bb9b259cf39c",
-                "sha256:af3d4a73793725138d6b334d9d247ce7e5f084d96284ed23f22ee626a7b88e39",
-                "sha256:b36b4f3920103a25e1d5d024d155c504080959582b928e91cb608a65c3a49e1a",
-                "sha256:b9574c6f03f685070d859e75c7f9eeca02d6933273b5e69572e5ff9d5e3931c3",
-                "sha256:bff6ad71c81b3bba8fa35f0f1921fb24ff4476235a6e94a26ada2e54370e6da7",
-                "sha256:c190f0899e9f9f8b6b7863debfb739abcb21a5c054f911ca3596d12b8a4c4c7f",
-                "sha256:c907f561b1e83e93fad565bac5ba9c22d96a54e7ea0267c708bffe863cbe4075",
-                "sha256:cae53c389825d3b46fb37538441f75d6aecc4174f615d048321b716df2757fb0",
-                "sha256:dd4a21253f42b8d2b48410cb31fe501d32f8b9fbeb1f55063ad102fe9c425e40",
-                "sha256:dde816ca9dac1d9c01dd504ea5967821606f02e510438120091b84e852367428",
-                "sha256:f2362f3cb0f3172c42938946dbc5b7843c2a28aec307c49100c8b38764eb6927",
-                "sha256:f328adcfebed9f11301eaedfa48e15bdece9b519fb27e6a8c01aa52a17ec31b3",
-                "sha256:f8afcf15cc511ada719a88e013cec87c11aff7b91f019295eb4530f96fe5ef2f",
-                "sha256:fb1bbeac803adea29cedd70781399c99138358c26d05fcbd23c13016b7f5ec65"
+                "sha256:24058827d8f5d633f97223f5148a7d22628099a3d2efe06654ce872f46f07cdb",
+                "sha256:256115a5bc7ea9e665c6314ed6671ee2c08ca380f9d5f130bd4d2c1f5848d695",
+                "sha256:38cf5c642fa808300bae1281460d4f9b7617cf864d4e383054a5ef336e344d32",
+                "sha256:484137cab8ecf47e137260daa20bafbba5f4e3ec7fda1c1e69ab299b75fa81c5",
+                "sha256:4f30a2bcd8e68adbb791ce1567fdb897357506f7ea6716f6bbdd3053ac4d9471",
+                "sha256:591bc04e507595887160ed7aa8d6785867fb86c5793911be79ccede61ae96f4d",
+                "sha256:5b6ab14c56bc9c7e3c30228a0a0b54b915b1579613f6e463ba6f4eb1382e7fd4",
+                "sha256:5d8314c92414ce7481eee7ad42b353943679cf6f30237b5ecbf7d835519e1212",
+                "sha256:71dcda943a471d826ea930dd449ac7e76db7be778fcd722deb63642bab32ea3f",
+                "sha256:7c42707ab981b6cf4b73490c16e9d17fcd5227039720ca14abe415d39a173a30",
+                "sha256:9caaf2b440efb39ecbc45e2fabde809cbe56272719131a6318fd9bf08b58e2cb",
+                "sha256:a2b8d7007f6280e36fa42652df47087ac7b0a7d7f09f9468f07792ba646aac2d",
+                "sha256:a6d495c1ef572519a7bac9534dbf6d94c40e5b6a608ef41136133377bba4aa08",
+                "sha256:a80d84f535642420dd17e16ae25bb46c7f4c16ee231105e7f3eb43976a89670a",
+                "sha256:b53ae5de5500529c76225d18eeb060efbcec90ad5e030713fe8dab0fb4531631",
+                "sha256:b6d17f37f6edd879141e64a5db17b67488cfeffeedad8c5cec0392305e9bc775",
+                "sha256:c9bcad65d66d594bffab8575f39420fe0ee96f66e23c4d927ebb4e24354ec1af",
+                "sha256:ca9e8300d8ba0b66d140820cf463438c8e7b4cdc6fd710c059bfcfb1531d03fb",
+                "sha256:de4ecae89c7d8b56169473e08f6bfd2df7f95015591f43126e4ea7865928677e"
             ],
-            "version": "==1.4.3"
+            "index": "pypi",
+            "markers": "python_version < '3.8'",
+            "version": "==1.5.1"
         },
         "typing-extensions": {
             "hashes": [
-                "sha256:49f75d16ff11f1cd258e1b988ccff82a3ca5570217d7ad8c5f48205dd99a677e",
-                "sha256:d8226d10bc02a29bcc81df19a26e56a9647f8b0a6d4a83924139f4a8b01f17b7",
-                "sha256:f1d25edafde516b146ecd0613dabcc61409817af4766fbbcfb8d1ad4ec441a34"
+                "sha256:4ca091dea149f945ec56afb48dae714f21e8692ef22a395223bcd328961b6a0e",
+                "sha256:7f001e5ac290a0c0401508864c7ec868be4e701886d5b573a9528ed3973d9d3b"
             ],
-            "markers": "python_version < '3.10'",
-            "version": "==3.10.0.2"
+            "index": "pypi",
+            "version": "==4.0.1"
         },
         "wrapt": {
             "hashes": [
-                "sha256:b62ffa81fb85f4332a4f609cab4ac40709470da05643a082ec1eb88e6d9b97d7"
-            ],
-            "version": "==1.12.1"
+                "sha256:086218a72ec7d986a3eddb7707c8c4526d677c7b35e355875a0fe2918b059179",
+                "sha256:0877fe981fd76b183711d767500e6b3111378ed2043c145e21816ee589d91096",
+                "sha256:0a017a667d1f7411816e4bf214646d0ad5b1da2c1ea13dec6c162736ff25a374",
+                "sha256:0cb23d36ed03bf46b894cfec777eec754146d68429c30431c99ef28482b5c1df",
+                "sha256:1fea9cd438686e6682271d36f3481a9f3636195578bab9ca3382e2f5f01fc185",
+                "sha256:220a869982ea9023e163ba915077816ca439489de6d2c09089b219f4e11b6785",
+                "sha256:25b1b1d5df495d82be1c9d2fad408f7ce5ca8a38085e2da41bb63c914baadff7",
+                "sha256:2dded5496e8f1592ec27079b28b6ad2a1ef0b9296d270f77b8e4a3a796cf6909",
+                "sha256:2ebdde19cd3c8cdf8df3fc165bc7827334bc4e353465048b36f7deeae8ee0918",
+                "sha256:43e69ffe47e3609a6aec0fe723001c60c65305784d964f5007d5b4fb1bc6bf33",
+                "sha256:46f7f3af321a573fc0c3586612db4decb7eb37172af1bc6173d81f5b66c2e068",
+                "sha256:47f0a183743e7f71f29e4e21574ad3fa95676136f45b91afcf83f6a050914829",
+                "sha256:498e6217523111d07cd67e87a791f5e9ee769f9241fcf8a379696e25806965af",
+                "sha256:4b9c458732450ec42578b5642ac53e312092acf8c0bfce140ada5ca1ac556f79",
+                "sha256:51799ca950cfee9396a87f4a1240622ac38973b6df5ef7a41e7f0b98797099ce",
+                "sha256:5601f44a0f38fed36cc07db004f0eedeaadbdcec90e4e90509480e7e6060a5bc",
+                "sha256:5f223101f21cfd41deec8ce3889dc59f88a59b409db028c469c9b20cfeefbe36",
+                "sha256:610f5f83dd1e0ad40254c306f4764fcdc846641f120c3cf424ff57a19d5f7ade",
+                "sha256:6a03d9917aee887690aa3f1747ce634e610f6db6f6b332b35c2dd89412912bca",
+                "sha256:705e2af1f7be4707e49ced9153f8d72131090e52be9278b5dbb1498c749a1e32",
+                "sha256:766b32c762e07e26f50d8a3468e3b4228b3736c805018e4b0ec8cc01ecd88125",
+                "sha256:77416e6b17926d953b5c666a3cb718d5945df63ecf922af0ee576206d7033b5e",
+                "sha256:778fd096ee96890c10ce96187c76b3e99b2da44e08c9e24d5652f356873f6709",
+                "sha256:78dea98c81915bbf510eb6a3c9c24915e4660302937b9ae05a0947164248020f",
+                "sha256:7dd215e4e8514004c8d810a73e342c536547038fb130205ec4bba9f5de35d45b",
+                "sha256:7dde79d007cd6dfa65afe404766057c2409316135cb892be4b1c768e3f3a11cb",
+                "sha256:81bd7c90d28a4b2e1df135bfbd7c23aee3050078ca6441bead44c42483f9ebfb",
+                "sha256:85148f4225287b6a0665eef08a178c15097366d46b210574a658c1ff5b377489",
+                "sha256:865c0b50003616f05858b22174c40ffc27a38e67359fa1495605f96125f76640",
+                "sha256:87883690cae293541e08ba2da22cacaae0a092e0ed56bbba8d018cc486fbafbb",
+                "sha256:8aab36778fa9bba1a8f06a4919556f9f8c7b33102bd71b3ab307bb3fecb21851",
+                "sha256:8c73c1a2ec7c98d7eaded149f6d225a692caa1bd7b2401a14125446e9e90410d",
+                "sha256:936503cb0a6ed28dbfa87e8fcd0a56458822144e9d11a49ccee6d9a8adb2ac44",
+                "sha256:944b180f61f5e36c0634d3202ba8509b986b5fbaf57db3e94df11abee244ba13",
+                "sha256:96b81ae75591a795d8c90edc0bfaab44d3d41ffc1aae4d994c5aa21d9b8e19a2",
+                "sha256:981da26722bebb9247a0601e2922cedf8bb7a600e89c852d063313102de6f2cb",
+                "sha256:ae9de71eb60940e58207f8e71fe113c639da42adb02fb2bcbcaccc1ccecd092b",
+                "sha256:b73d4b78807bd299b38e4598b8e7bd34ed55d480160d2e7fdaabd9931afa65f9",
+                "sha256:d4a5f6146cfa5c7ba0134249665acd322a70d1ea61732723c7d3e8cc0fa80755",
+                "sha256:dd91006848eb55af2159375134d724032a2d1d13bcc6f81cd8d3ed9f2b8e846c",
+                "sha256:e05e60ff3b2b0342153be4d1b597bbcfd8330890056b9619f4ad6b8d5c96a81a",
+                "sha256:e6906d6f48437dfd80464f7d7af1740eadc572b9f7a4301e7dd3d65db285cacf",
+                "sha256:e92d0d4fa68ea0c02d39f1e2f9cb5bc4b4a71e8c442207433d8db47ee79d7aa3",
+                "sha256:e94b7d9deaa4cc7bac9198a58a7240aaf87fe56c6277ee25fa5b3aa1edebd229",
+                "sha256:ea3e746e29d4000cd98d572f3ee2a6050a4f784bb536f4ac1f035987fc1ed83e",
+                "sha256:ec7e20258ecc5174029a0f391e1b948bf2906cd64c198a9b8b281b811cbc04de",
+                "sha256:ec9465dd69d5657b5d2fa6133b3e1e989ae27d29471a672416fd729b429eb554",
+                "sha256:f122ccd12fdc69628786d0c947bdd9cb2733be8f800d88b5a37c57f1f1d73c10",
+                "sha256:f99c0489258086308aad4ae57da9e8ecf9e1f3f30fa35d5e170b4d4896554d80",
+                "sha256:f9c51d9af9abb899bd34ace878fbec8bf357b3194a10c4e8e0a25512826ef056",
+                "sha256:fd76c47f20984b43d93de9a82011bb6e5f8325df6c9ed4d8310029a55fa361ea"
+            ],
+            "version": "==1.13.3"
         },
         "zipp": {
             "hashes": [
-                "sha256:71c644c5369f4a6e07636f0aa966270449561fcea2e3d6747b8d23efaa9d7832",
-                "sha256:9fe5ea21568a0a70e50f273397638d39b03353731e6cbbb3fd8502a33fec40bc"
+                "sha256:9f50f446828eb9d45b267433fd3e9da8d801f614129124863f9c51ebceafb87d",
+                "sha256:b47250dd24f92b7dd6a0a8fc5244da14608f3ca90a5efcd37a3b1642fac9a375"
             ],
-            "markers": "python_version >= '3.6'",
-            "version": "==3.6.0"
+            "version": "==3.7.0"
         }
     }
 }

examples/Pipfile

@@ -5,35 +5,28 @@ name = "pypi"
 
 [packages]
 freesurfer-surface = {editable = true, path = "./.."}
-#pandas = "*"
+pandas = "*"
 notebook = "*"
 
-# python3.6 compatibility
-# >   File "/home/runner/.local/share/virtualenvs/examples-hI4yCRi6/lib/python3.6/site-packages/nbclient/client.py", line 13, in <module>
-# >     from async_generator import asynccontextmanager  # type: ignore
-# > ModuleNotFoundError: No module named 'async_generator'
-async_generator = {version = "*", markers = "python_version == '3.6'"}
-# https://github.com/ipython/ipykernel/commit/12db7f9593def374230b505000f07a1168ef7188
-ipykernel = "<6"
-# https://github.com/ipython/ipython/commit/fa00749572b02729f2dbe2c3317100895f2915d6
-ipython = "<7.17"
-# https://github.com/Julian/jsonschema/commit/3fb0576411701b57899cf9c812e32046ddc2adf9
-jsonschema = "<4"
-# https://github.com/jupyter/nbconvert/commit/6f1a56f63a9a8dc8ee5178aa6d918db589b6d439
-nbconvert = "<6.1"
-numpy = "<1.20"
-pandas = "<1.2"
-traitlets = "<5"
-
 # python3.7 compatibility
-# >   File "[...]/lib/python3.7/site-packages/jsonschema/__init__.py", line 33, in <module>
-# >     import importlib_metadata as metadata
-# > ModuleNotFoundError: No module named 'importlib_metadata'
-importlib_metadata = {version = "*", markers = "python_version <= '3.7'"}
-# >   File "[...]/lib/python3.7/site-packages/importlib_metadata/_compat.py", line 16, in <module>
-# >     from typing_extensions import Protocol  # type: ignore
+ipython = "<8"
+numpy = "<1.22"
+
+# python<=3.8 compatibility
+# >   File "[...]/python3.8/site-packages/jsonschema/_utils.py", line 12, in <module>
+# >     import importlib_resources as resources  # type: ignore
+# > ModuleNotFoundError: No module named 'importlib_resources'
+importlib-resources = {markers = "python_version <= '3.8'"}
+# >   File "[...]/python3.8/site-packages/importlib_resources/_compat.py", line 11, in <module>
+# >     from zipp import Path as ZipPath  # type: ignore
+# > ModuleNotFoundError: No module named 'zipp'
+zipp = {markers = "python_version <= '3.8'"}
+
+# python3.10 compatibility
+# >   File "[...]/lib/python3.10/site-packages/mypy/main.py", line 11, in <module>
+# >     from typing_extensions import Final, NoReturn
 # > ModuleNotFoundError: No module named 'typing_extensions'
-typing_extensions = {version = "*", markers = "python_version <= '3.7'"}
+typing-extensions = {markers = ""}
 
 [dev-packages]
 

examples/Pipfile.lock

@@ -1,7 +1,7 @@
 {
     "_meta": {
         "hash": {
-            "sha256": "e65bd8e38aeb21a5fc7ddec52f5d04278a109c0279a77b965a21934ce2ab5c62"
+            "sha256": "d1644f95b10ba3d7deff00b94a543c740125737b7fbad68f0f4a6a034a551e66"
         },
         "pipfile-spec": 6,
         "requires": {
@@ -18,35 +18,46 @@
     "default": {
         "argon2-cffi": {
             "hashes": [
-                "sha256:165cadae5ac1e26644f5ade3bd9c18d89963be51d9ea8817bd671006d7909057",
-                "sha256:217b4f0f853ccbbb5045242946ad2e162e396064575860141b71a85eb47e475a",
-                "sha256:245f64a203012b144b7b8c8ea6d468cb02b37caa5afee5ba4a10c80599334f6a",
-                "sha256:4ad152c418f7eb640eac41ac815534e6aa61d1624530b8e7779114ecfbf327f8",
-                "sha256:566ffb581bbd9db5562327aee71b2eda24a1c15b23a356740abe3c011bbe0dcb",
-                "sha256:65213a9174320a1aee03fe826596e0620783966b49eb636955958b3074e87ff9",
-                "sha256:bc513db2283c385ea4da31a2cd039c33380701f376f4edd12fe56db118a3b21a",
-                "sha256:c7a7c8cc98ac418002090e4add5bebfff1b915ea1cb459c578cd8206fef10378",
-                "sha256:e4d8f0ae1524b7b0372a3e574a2561cbdddb3fdb6c28b70a72868189bda19659",
-                "sha256:f710b61103d1a1f692ca3ecbd1373e28aa5e545ac625ba067ff2feca1b2bb870",
-                "sha256:fa7e7d1fc22514a32b1761fdfa1882b6baa5c36bb3ef557bdd69e6fc9ba14a41"
-            ],
-            "version": "==21.1.0"
-        },
-        "async-generator": {
-            "hashes": [
-                "sha256:01c7bf666359b4967d2cda0000cc2e4af16a0ae098cbffcb8472fb9e8ad6585b",
-                "sha256:6ebb3d106c12920aaae42ccb6f787ef5eefdcdd166ea3d628fa8476abe712144"
-            ],
-            "index": "pypi",
-            "markers": "python_version == '3.6'",
-            "version": "==1.10"
+                "sha256:8c976986f2c5c0e5000919e6de187906cfd81fb1c72bf9d88c01177e77da7f80",
+                "sha256:d384164d944190a7dd7ef22c6aa3ff197da12962bd04b17f64d4e93d934dba5b"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==21.3.0"
+        },
+        "argon2-cffi-bindings": {
+            "hashes": [
+                "sha256:20ef543a89dee4db46a1a6e206cd015360e5a75822f76df533845c3cbaf72670",
+                "sha256:2c3e3cc67fdb7d82c4718f19b4e7a87123caf8a93fde7e23cf66ac0337d3cb3f",
+                "sha256:3b9ef65804859d335dc6b31582cad2c5166f0c3e7975f324d9ffaa34ee7e6583",
+                "sha256:3e385d1c39c520c08b53d63300c3ecc28622f076f4c2b0e6d7e796e9f6502194",
+                "sha256:58ed19212051f49a523abb1dbe954337dc82d947fb6e5a0da60f7c8471a8476c",
+                "sha256:5e00316dabdaea0b2dd82d141cc66889ced0cdcbfa599e8b471cf22c620c329a",
+                "sha256:603ca0aba86b1349b147cab91ae970c63118a0f30444d4bc80355937c950c082",
+                "sha256:6a22ad9800121b71099d0fb0a65323810a15f2e292f2ba450810a7316e128ee5",
+                "sha256:8cd69c07dd875537a824deec19f978e0f2078fdda07fd5c42ac29668dda5f40f",
+                "sha256:93f9bf70084f97245ba10ee36575f0c3f1e7d7724d67d8e5b08e61787c320ed7",
+                "sha256:9524464572e12979364b7d600abf96181d3541da11e23ddf565a32e70bd4dc0d",
+                "sha256:b2ef1c30440dbbcba7a5dc3e319408b59676e2e039e2ae11a8775ecf482b192f",
+                "sha256:b746dba803a79238e925d9046a63aa26bf86ab2a2fe74ce6b009a1c3f5c8f2ae",
+                "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3",
+                "sha256:bd46088725ef7f58b5a1ef7ca06647ebaf0eb4baff7d1d0d177c6cc8744abd86",
+                "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367",
+                "sha256:d4966ef5848d820776f5f562a7d45fdd70c2f330c961d0d745b784034bd9f48d",
+                "sha256:e415e3f62c8d124ee16018e491a009937f8cf7ebf5eb430ffc5de21b900dad93",
+                "sha256:ed2937d286e2ad0cc79a7087d3c272832865f779430e0cc2b4f3718d3159b0cb",
+                "sha256:f1152ac548bd5b8bcecfb0b0371f082037e47128653df2e8ba6e914d384f3c3e",
+                "sha256:f9f8b450ed0547e3d473fdc8612083fd08dd2120d6ac8f73828df9b7d45bb351"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==21.2.0"
         },
         "attrs": {
             "hashes": [
-                "sha256:149e90d6d8ac20db7a955ad60cf0e6881a3f20d37096140088356da6c716b0b1",
-                "sha256:ef6aaac3ca6cd92904cdd0d83f629a15f18053ec84e6432106f7a4d04ae4f5fb"
+                "sha256:2d27e3784d7a565d36ab851fe94887c5eccd6a463168875832a1be79c82828b4",
+                "sha256:626ba8234211db98e869df76230a137c4c40a12d72445c45d5f5b716f076e2fd"
             ],
-            "version": "==21.2.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==21.4.0"
         },
         "backcall": {
             "hashes": [
@@ -60,70 +71,105 @@
                 "sha256:0900d8b37eba61a802ee40ac0061f8c2b5dee29c1927dd1d233e075ebf5a71da",
                 "sha256:4d2651ab93271d1129ac9cbc679f524565cc8a1b791909c4a51eac4446a15994"
             ],
+            "markers": "python_version >= '3.6'",
             "version": "==4.1.0"
         },
         "cffi": {
             "hashes": [
-                "sha256:06c54a68935738d206570b20da5ef2b6b6d92b38ef3ec45c5422c0ebaf338d4d",
-                "sha256:0c0591bee64e438883b0c92a7bed78f6290d40bf02e54c5bf0978eaf36061771",
-                "sha256:19ca0dbdeda3b2615421d54bef8985f72af6e0c47082a8d26122adac81a95872",
-                "sha256:22b9c3c320171c108e903d61a3723b51e37aaa8c81255b5e7ce102775bd01e2c",
-                "sha256:26bb2549b72708c833f5abe62b756176022a7b9a7f689b571e74c8478ead51dc",
-                "sha256:33791e8a2dc2953f28b8d8d300dde42dd929ac28f974c4b4c6272cb2955cb762",
-                "sha256:3c8d896becff2fa653dc4438b54a5a25a971d1f4110b32bd3068db3722c80202",
-                "sha256:4373612d59c404baeb7cbd788a18b2b2a8331abcc84c3ba40051fcd18b17a4d5",
-                "sha256:487d63e1454627c8e47dd230025780e91869cfba4c753a74fda196a1f6ad6548",
-                "sha256:48916e459c54c4a70e52745639f1db524542140433599e13911b2f329834276a",
-                "sha256:4922cd707b25e623b902c86188aca466d3620892db76c0bdd7b99a3d5e61d35f",
-                "sha256:55af55e32ae468e9946f741a5d51f9896da6b9bf0bbdd326843fec05c730eb20",
-                "sha256:57e555a9feb4a8460415f1aac331a2dc833b1115284f7ded7278b54afc5bd218",
-                "sha256:5d4b68e216fc65e9fe4f524c177b54964af043dde734807586cf5435af84045c",
-                "sha256:64fda793737bc4037521d4899be780534b9aea552eb673b9833b01f945904c2e",
-                "sha256:6d6169cb3c6c2ad50db5b868db6491a790300ade1ed5d1da29289d73bbe40b56",
-                "sha256:7bcac9a2b4fdbed2c16fa5681356d7121ecabf041f18d97ed5b8e0dd38a80224",
-                "sha256:80b06212075346b5546b0417b9f2bf467fea3bfe7352f781ffc05a8ab24ba14a",
-                "sha256:818014c754cd3dba7229c0f5884396264d51ffb87ec86e927ef0be140bfdb0d2",
-                "sha256:8eb687582ed7cd8c4bdbff3df6c0da443eb89c3c72e6e5dcdd9c81729712791a",
-                "sha256:99f27fefe34c37ba9875f224a8f36e31d744d8083e00f520f133cab79ad5e819",
-                "sha256:9f3e33c28cd39d1b655ed1ba7247133b6f7fc16fa16887b120c0c670e35ce346",
-                "sha256:a8661b2ce9694ca01c529bfa204dbb144b275a31685a075ce123f12331be790b",
-                "sha256:a9da7010cec5a12193d1af9872a00888f396aba3dc79186604a09ea3ee7c029e",
-                "sha256:aedb15f0a5a5949ecb129a82b72b19df97bbbca024081ed2ef88bd5c0a610534",
-                "sha256:b315d709717a99f4b27b59b021e6207c64620790ca3e0bde636a6c7f14618abb",
-                "sha256:ba6f2b3f452e150945d58f4badd92310449876c4c954836cfb1803bdd7b422f0",
-                "sha256:c33d18eb6e6bc36f09d793c0dc58b0211fccc6ae5149b808da4a62660678b156",
-                "sha256:c9a875ce9d7fe32887784274dd533c57909b7b1dcadcc128a2ac21331a9765dd",
-                "sha256:c9e005e9bd57bc987764c32a1bee4364c44fdc11a3cc20a40b93b444984f2b87",
-                "sha256:d2ad4d668a5c0645d281dcd17aff2be3212bc109b33814bbb15c4939f44181cc",
-                "sha256:d950695ae4381ecd856bcaf2b1e866720e4ab9a1498cba61c602e56630ca7195",
-                "sha256:e22dcb48709fc51a7b58a927391b23ab37eb3737a98ac4338e2448bef8559b33",
-                "sha256:e8c6a99be100371dbb046880e7a282152aa5d6127ae01783e37662ef73850d8f",
-                "sha256:e9dc245e3ac69c92ee4c167fbdd7428ec1956d4e754223124991ef29eb57a09d",
-                "sha256:eb687a11f0a7a1839719edd80f41e459cc5366857ecbed383ff376c4e3cc6afd",
-                "sha256:eb9e2a346c5238a30a746893f23a9535e700f8192a68c07c0258e7ece6ff3728",
-                "sha256:ed38b924ce794e505647f7c331b22a693bee1538fdf46b0222c4717b42f744e7",
-                "sha256:f0010c6f9d1a4011e429109fda55a225921e3206e7f62a0c22a35344bfd13cca",
-                "sha256:f0c5d1acbfca6ebdd6b1e3eded8d261affb6ddcf2186205518f1428b8569bb99",
-                "sha256:f10afb1004f102c7868ebfe91c28f4a712227fe4cb24974350ace1f90e1febbf",
-                "sha256:f174135f5609428cc6e1b9090f9268f5c8935fddb1b25ccb8255a2d50de6789e",
-                "sha256:f3ebe6e73c319340830a9b2825d32eb6d8475c1dac020b4f0aa774ee3b898d1c",
-                "sha256:f627688813d0a4140153ff532537fbe4afea5a3dffce1f9deb7f91f848a832b5",
-                "sha256:fd4305f86f53dfd8cd3522269ed7fc34856a8ee3709a5e28b2836b2db9d4cd69"
-            ],
-            "version": "==1.14.6"
+                "sha256:00c878c90cb53ccfaae6b8bc18ad05d2036553e6d9d1d9dbcf323bbe83854ca3",
+                "sha256:0104fb5ae2391d46a4cb082abdd5c69ea4eab79d8d44eaaf79f1b1fd806ee4c2",
+                "sha256:06c48159c1abed75c2e721b1715c379fa3200c7784271b3c46df01383b593636",
+                "sha256:0808014eb713677ec1292301ea4c81ad277b6cdf2fdd90fd540af98c0b101d20",
+                "sha256:10dffb601ccfb65262a27233ac273d552ddc4d8ae1bf93b21c94b8511bffe728",
+                "sha256:14cd121ea63ecdae71efa69c15c5543a4b5fbcd0bbe2aad864baca0063cecf27",
+                "sha256:17771976e82e9f94976180f76468546834d22a7cc404b17c22df2a2c81db0c66",
+                "sha256:181dee03b1170ff1969489acf1c26533710231c58f95534e3edac87fff06c443",
+                "sha256:23cfe892bd5dd8941608f93348c0737e369e51c100d03718f108bf1add7bd6d0",
+                "sha256:263cc3d821c4ab2213cbe8cd8b355a7f72a8324577dc865ef98487c1aeee2bc7",
+                "sha256:2756c88cbb94231c7a147402476be2c4df2f6078099a6f4a480d239a8817ae39",
+                "sha256:27c219baf94952ae9d50ec19651a687b826792055353d07648a5695413e0c605",
+                "sha256:2a23af14f408d53d5e6cd4e3d9a24ff9e05906ad574822a10563efcef137979a",
+                "sha256:31fb708d9d7c3f49a60f04cf5b119aeefe5644daba1cd2a0fe389b674fd1de37",
+                "sha256:3415c89f9204ee60cd09b235810be700e993e343a408693e80ce7f6a40108029",
+                "sha256:3773c4d81e6e818df2efbc7dd77325ca0dcb688116050fb2b3011218eda36139",
+                "sha256:3b96a311ac60a3f6be21d2572e46ce67f09abcf4d09344c49274eb9e0bf345fc",
+                "sha256:3f7d084648d77af029acb79a0ff49a0ad7e9d09057a9bf46596dac9514dc07df",
+                "sha256:41d45de54cd277a7878919867c0f08b0cf817605e4eb94093e7516505d3c8d14",
+                "sha256:4238e6dab5d6a8ba812de994bbb0a79bddbdf80994e4ce802b6f6f3142fcc880",
+                "sha256:45db3a33139e9c8f7c09234b5784a5e33d31fd6907800b316decad50af323ff2",
+                "sha256:45e8636704eacc432a206ac7345a5d3d2c62d95a507ec70d62f23cd91770482a",
+                "sha256:4958391dbd6249d7ad855b9ca88fae690783a6be9e86df65865058ed81fc860e",
+                "sha256:4a306fa632e8f0928956a41fa8e1d6243c71e7eb59ffbd165fc0b41e316b2474",
+                "sha256:57e9ac9ccc3101fac9d6014fba037473e4358ef4e89f8e181f8951a2c0162024",
+                "sha256:59888172256cac5629e60e72e86598027aca6bf01fa2465bdb676d37636573e8",
+                "sha256:5e069f72d497312b24fcc02073d70cb989045d1c91cbd53979366077959933e0",
+                "sha256:64d4ec9f448dfe041705426000cc13e34e6e5bb13736e9fd62e34a0b0c41566e",
+                "sha256:6dc2737a3674b3e344847c8686cf29e500584ccad76204efea14f451d4cc669a",
+                "sha256:74fdfdbfdc48d3f47148976f49fab3251e550a8720bebc99bf1483f5bfb5db3e",
+                "sha256:75e4024375654472cc27e91cbe9eaa08567f7fbdf822638be2814ce059f58032",
+                "sha256:786902fb9ba7433aae840e0ed609f45c7bcd4e225ebb9c753aa39725bb3e6ad6",
+                "sha256:8b6c2ea03845c9f501ed1313e78de148cd3f6cad741a75d43a29b43da27f2e1e",
+                "sha256:91d77d2a782be4274da750752bb1650a97bfd8f291022b379bb8e01c66b4e96b",
+                "sha256:91ec59c33514b7c7559a6acda53bbfe1b283949c34fe7440bcf917f96ac0723e",
+                "sha256:920f0d66a896c2d99f0adbb391f990a84091179542c205fa53ce5787aff87954",
+                "sha256:a5263e363c27b653a90078143adb3d076c1a748ec9ecc78ea2fb916f9b861962",
+                "sha256:abb9a20a72ac4e0fdb50dae135ba5e77880518e742077ced47eb1499e29a443c",
+                "sha256:c2051981a968d7de9dd2d7b87bcb9c939c74a34626a6e2f8181455dd49ed69e4",
+                "sha256:c21c9e3896c23007803a875460fb786118f0cdd4434359577ea25eb556e34c55",
+                "sha256:c2502a1a03b6312837279c8c1bd3ebedf6c12c4228ddbad40912d671ccc8a962",
+                "sha256:d4d692a89c5cf08a8557fdeb329b82e7bf609aadfaed6c0d79f5a449a3c7c023",
+                "sha256:da5db4e883f1ce37f55c667e5c0de439df76ac4cb55964655906306918e7363c",
+                "sha256:e7022a66d9b55e93e1a845d8c9eba2a1bebd4966cd8bfc25d9cd07d515b33fa6",
+                "sha256:ef1f279350da2c586a69d32fc8733092fd32cc8ac95139a00377841f59a3f8d8",
+                "sha256:f54a64f8b0c8ff0b64d18aa76675262e1700f3995182267998c31ae974fbc382",
+                "sha256:f5c7150ad32ba43a07c4479f40241756145a1f03b43480e058cfd862bf5041c7",
+                "sha256:f6f824dc3bce0edab5f427efcfb1d63ee75b6fcb7282900ccaf925be84efb0fc",
+                "sha256:fd8a250edc26254fe5b33be00402e6d287f562b6a5b2152dec302fa15bb3e997",
+                "sha256:ffaa5c925128e29efbde7301d8ecaf35c8c60ffbcd6a1ffd3a552177c8e5e796"
+            ],
+            "version": "==1.15.0"
+        },
+        "debugpy": {
+            "hashes": [
+                "sha256:01e98c594b3e66d529e40edf314f849cd1a21f7a013298df58cd8e263bf8e184",
+                "sha256:16db27b4b91991442f91d73604d32080b30de655aca9ba821b1972ea8171021b",
+                "sha256:17a25ce9d7714f92fc97ef00cc06269d7c2b163094990ada30156ed31d9a5030",
+                "sha256:194f95dd3e84568b5489aab5689a3a2c044e8fdc06f1890b8b4f70b6b89f2778",
+                "sha256:1ec3a086e14bba6c472632025b8fe5bdfbaef2afa1ebd5c6615ce6ed8d89bc67",
+                "sha256:23df67fc56d59e386c342428a7953c2c06cc226d8525b11319153e96afb65b0c",
+                "sha256:26fbe53cca45a608679094791ce587b6e2798acd1d4777a8b303b07622e85182",
+                "sha256:2b073ad5e8d8c488fbb6a116986858bab0c9c4558f28deb8832c7a5a27405bd6",
+                "sha256:318f81f37341e4e054b4267d39896b73cddb3612ca13b39d7eea45af65165e1d",
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+                "sha256:f73988422b17f071ad3c4383551ace1ba5ed810cbab5f9c362783d22d40a08dc"
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+            "version": "==1.5.1"
         },
         "decorator": {
             "hashes": [
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-                "sha256:e59913af105b9860aa2c8d3272d9de5a56a4e608db9a2f167a8480b323d529a7"
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-            "version": "==5.1.0"
+            "markers": "python_version >= '3.5'",
+            "version": "==5.1.1"
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             "version": "==0.7.1"
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@@ -131,36 +177,36 @@
                 "sha256:589f874b313739ad35be6e0cd7efde2a4e9b6fea91edcc34e58ecbb8dbe56d19",
                 "sha256:c70dd71abe5a8c85e55e12c19bd91ccfeec11a6e99044204511f9ed547d48451"
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+            "markers": "python_version >= '2.7'",
             "version": "==0.3"
         },
         "freesurfer-surface": {
             "editable": true,
             "path": "./.."
         },
-        "importlib-metadata": {
+        "importlib-resources": {
             "hashes": [
-                "sha256:b618b6d2d5ffa2f16add5697cf57a46c76a56229b0ed1c438322e4e95645bd15",
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-            "markers": "python_version <= '3.7'",
-            "version": "==4.8.1"
+            "markers": "python_version <= '3.8'",
+            "version": "==5.4.0"
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         "ipykernel": {
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-                "sha256:66f824af1ef4650e1e2f6c42e1423074321440ef79ca3651a6cfd06a4e25e42f"
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-            "index": "pypi",
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+            "markers": "python_version >= '3.7'",
+            "version": "==6.7.0"
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-                "sha256:9f4fcb31d3b2c533333893b9172264e4821c1ac91839500f31bd43f2c59b3ccf"
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-            "version": "==7.16.1"
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@@ -171,39 +217,43 @@
         },
         "jedi": {
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-                "sha256:92550a404bad8afed881a137ec9a461fed49eca661414be45059329614ed0707"
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-            "version": "==0.18.0"
+            "markers": "python_version >= '3.6'",
+            "version": "==0.18.1"
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         "jinja2": {
             "hashes": [
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-                "sha256:8569982d3f0889eed11dd620c706d39b60c36d6d25843961f33f77fb6bc6b20c"
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+            "markers": "python_version >= '3.6'",
+            "version": "==3.0.3"
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         "jsonschema": {
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-            "version": "==3.2.0"
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+            "markers": "python_full_version >= '3.6.1'",
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@@ -217,6 +267,7 @@
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@@ -224,6 +275,7 @@
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@@ -231,27 +283,36 @@
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@@ -259,18 +320,31 @@
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@@ -280,131 +354,134 @@
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@@ -423,77 +500,84 @@
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-                "sha256:73ff61b1411e3fb0ba144b8f08d6749749775fe89688093e1efef9839d2dcc35",
-                "sha256:772e94c2c6864f2cd2ffbe58bb3bdefbe2a32afa0acb1a77e472aac831f83427",
-                "sha256:773c781216f8c2900b42a7b638d5b517bb134ae1acbebe4d1e8f1f41ea60eb4b",
-                "sha256:a0c772d791c38bbc77be659af29bb14c38ced151433592e326361610250c605b",
-                "sha256:b29b869cf58412ca5738d23691e96d8aff535e17390128a1a52717c9a109da4f",
-                "sha256:c1a9ff320fa699337e05edcaae79ef8c2880b52720bc031b219e5b5008ebbdef",
-                "sha256:cd3caef37a415fd0dae6148a1b6957a8c5f275a62cca02e18474608cb263640c",
-                "sha256:d5ec194c9c573aafaceebf05fc400656722793dac57f254cd4741f3c27ae57b4",
-                "sha256:da6e5e818d18459fa46fac0a4a4e543507fe1110e808101277c5a2b5bab0cd2d",
-                "sha256:e79d94ca58fcafef6395f6352383fa1a76922268fa02caa2272fff501c2fdc78",
-                "sha256:f3ef98d7b76da5eb19c37fda834d50262ff9167c65658d1d8f974d2e4d90676b",
-                "sha256:f4c8cabb46ff8e5d61f56a037974228e978f26bfefce4f61a4b1ac0ba7a2ab72"
-            ],
-            "version": "==0.18.0"
+                "sha256:0e3e1fcc45199df76053026a51cc59ab2ea3fc7c094c6627e93b7b44cdae2c8c",
+                "sha256:1b34eedd6812bf4d33814fca1b66005805d3640ce53140ab8bbb1e2651b0d9bc",
+                "sha256:4ed6784ceac462a7d6fcb7e9b663e93b9a6fb373b7f43594f9ff68875788e01e",
+                "sha256:5d45866ececf4a5fff8742c25722da6d4c9e180daa7b405dc0a2a2790d668c26",
+                "sha256:636ce2dc235046ccd3d8c56a7ad54e99d5c1cd0ef07d9ae847306c91d11b5fec",
+                "sha256:6455fc599df93d1f60e1c5c4fe471499f08d190d57eca040c0ea182301321286",
+                "sha256:6bc66318fb7ee012071b2792024564973ecc80e9522842eb4e17743604b5e045",
+                "sha256:7bfe2388663fd18bd8ce7db2c91c7400bf3e1a9e8bd7d63bf7e77d39051b85ec",
+                "sha256:7ec335fc998faa4febe75cc5268a9eac0478b3f681602c1f27befaf2a1abe1d8",
+                "sha256:914474c9f1d93080338ace89cb2acee74f4f666fb0424896fcfb8d86058bf17c",
+                "sha256:b568f35ad53a7b07ed9b1b2bae09eb15cdd671a5ba5d2c66caee40dbf91c68ca",
+                "sha256:cdfd2c361b8a8e5d9499b9082b501c452ade8bbf42aef97ea04854f4a3f43b22",
+                "sha256:d1b96547410f76078eaf66d282ddca2e4baae8964364abb4f4dcdde855cd123a",
+                "sha256:d4d61f8b993a7255ba714df3aca52700f8125289f84f704cf80916517c46eb96",
+                "sha256:d7a096646eab884bf8bed965bad63ea327e0d0c38989fc83c5ea7b8a87037bfc",
+                "sha256:df46c854f490f81210870e509818b729db4488e1f30f2a1ce1698b2295a878d1",
+                "sha256:e24a828f57e0c337c8d8bb9f6b12f09dfdf0273da25fda9e314f0b684b415a07",
+                "sha256:e4f3149fd5eb9b285d6bfb54d2e5173f6a116fe19172686797c056672689daf6",
+                "sha256:e92a52c166426efbe0d1ec1332ee9119b6d32fc1f0bbfd55d5c1088070e7fc1b",
+                "sha256:f87cc2863ef33c709e237d4b5f4502a62a00fab450c9e020892e8e2ede5847f5",
+                "sha256:fd8da6d0124efa2f67d86fa70c851022f87c98e205f0594e1fae044e7119a5a6"
+            ],
+            "markers": "python_version >= '3.7'",
+            "version": "==0.18.1"
         },
         "python-dateutil": {
             "hashes": [
                 "sha256:0123cacc1627ae19ddf3c27a5de5bd67ee4586fbdd6440d9748f8abb483d3e86",
                 "sha256:961d03dc3453ebbc59dbdea9e4e11c5651520a876d0f4db161e8674aae935da9"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.8.2"
         },
         "pytz": {
@@ -505,6 +589,7 @@
         },
         "pyzmq": {
             "hashes": [
+                "sha256:08c4e315a76ef26eb833511ebf3fa87d182152adf43dedee8d79f998a2162a0b",
                 "sha256:0ca6cd58f62a2751728016d40082008d3b3412a7f28ddfb4a2f0d3c130f69e74",
                 "sha256:1621e7a2af72cced1f6ec8ca8ca91d0f76ac236ab2e8828ac8fe909512d566cb",
                 "sha256:18cd854b423fce44951c3a4d3e686bac8f1243d954f579e120a1714096637cc0",
@@ -513,7 +598,10 @@
                 "sha256:3a4c9886d61d386b2b493377d980f502186cd71d501fffdba52bd2a0880cef4f",
                 "sha256:3c1895c95be92600233e476fe283f042e71cf8f0b938aabf21b7aafa62a8dac9",
                 "sha256:42abddebe2c6a35180ca549fadc7228d23c1e1f76167c5ebc8a936b5804ea2df",
+                "sha256:468bd59a588e276961a918a3060948ae68f6ff5a7fa10bb2f9160c18fe341067",
                 "sha256:480b9931bfb08bf8b094edd4836271d4d6b44150da051547d8c7113bf947a8b0",
+                "sha256:53f4fd13976789ffafedd4d46f954c7bb01146121812b72b4ddca286034df966",
+                "sha256:62bcade20813796c426409a3e7423862d50ff0639f5a2a95be4b85b09a618666",
                 "sha256:67db33bea0a29d03e6eeec55a8190e033318cee3cbc732ba8fd939617cbf762d",
                 "sha256:6b217b8f9dfb6628f74b94bdaf9f7408708cb02167d644edca33f38746ca12dd",
                 "sha256:7661fc1d5cb73481cf710a1418a4e1e301ed7d5d924f91c67ba84b2a1b89defd",
@@ -524,25 +612,32 @@
                 "sha256:80e043a89c6cadefd3a0712f8a1322038e819ebe9dbac7eca3bce1721bcb63bf",
                 "sha256:851977788b9caa8ed011f5f643d3ee8653af02c5fc723fa350db5125abf2be7b",
                 "sha256:8eddc033e716f8c91c6a2112f0a8ebc5e00532b4a6ae1eb0ccc48e027f9c671c",
+                "sha256:902319cfe23366595d3fa769b5b751e6ee6750a0a64c5d9f757d624b2ac3519e",
                 "sha256:954e73c9cd4d6ae319f1c936ad159072b6d356a92dcbbabfd6e6204b9a79d356",
                 "sha256:ab888624ed68930442a3f3b0b921ad7439c51ba122dbc8c386e6487a658e4a4e",
                 "sha256:acebba1a23fb9d72b42471c3771b6f2f18dcd46df77482612054bd45c07dfa36",
                 "sha256:b4ebed0977f92320f6686c96e9e8dd29eed199eb8d066936bac991afc37cbb70",
+                "sha256:badb868fff14cfd0e200eaa845887b1011146a7d26d579aaa7f966c203736b92",
                 "sha256:be4e0f229cf3a71f9ecd633566bd6f80d9fa6afaaff5489492be63fe459ef98c",
                 "sha256:c0f84360dcca3481e8674393bdf931f9f10470988f87311b19d23cda869bb6b7",
                 "sha256:c1e41b32d6f7f9c26bc731a8b529ff592f31fc8b6ef2be9fa74abd05c8a342d7",
+                "sha256:c88fa7410e9fc471e0858638f403739ee869924dd8e4ae26748496466e27ac59",
                 "sha256:cf98fd7a6c8aaa08dbc699ffae33fd71175696d78028281bc7b832b26f00ca57",
                 "sha256:d072f7dfbdb184f0786d63bda26e8a0882041b1e393fbe98940395f7fab4c5e2",
+                "sha256:d1b5d457acbadcf8b27561deeaa386b0217f47626b29672fa7bd31deb6e91e1b",
                 "sha256:d3dcb5548ead4f1123851a5ced467791f6986d68c656bc63bfff1bf9e36671e2",
                 "sha256:d6157793719de168b199194f6b6173f0ccd3bf3499e6870fac17086072e39115",
                 "sha256:d728b08448e5ac3e4d886b165385a262883c34b84a7fe1166277fe675e1c197a",
                 "sha256:de8df0684398bd74ad160afdc2a118ca28384ac6f5e234eb0508858d8d2d9364",
                 "sha256:e6a02cf7271ee94674a44f4e62aa061d2d049001c844657740e156596298b70b",
                 "sha256:ea12133df25e3a6918718fbb9a510c6ee5d3fdd5a346320421aac3882f4feeea",
+                "sha256:ea5a79e808baef98c48c884effce05c31a0698c1057de8fc1c688891043c1ce1",
                 "sha256:f43b4a2e6218371dd4f41e547bd919ceeb6ebf4abf31a7a0669cd11cd91ea973",
                 "sha256:f762442bab706fd874064ca218b33a1d8e40d4938e96c24dafd9b12e28017f45",
-                "sha256:f89468059ebc519a7acde1ee50b779019535db8dcf9b8c162ef669257fef7a93"
+                "sha256:f89468059ebc519a7acde1ee50b779019535db8dcf9b8c162ef669257fef7a93",
+                "sha256:f907c7359ce8bf7f7e63c82f75ad0223384105f5126f313400b7e8004d9b33c3"
             ],
+            "markers": "python_version >= '3.6'",
             "version": "==22.3.0"
         },
         "send2trash": {
@@ -552,11 +647,20 @@
             ],
             "version": "==1.8.0"
         },
+        "setuptools": {
+            "hashes": [
+                "sha256:2404879cda71495fc4d5cbc445ed52fdaddf352b36e40be8dcc63147cb4edabe",
+                "sha256:68eb94073fc486091447fcb0501efd6560a0e5a1839ba249e5ff3c4c93f05f90"
+            ],
+            "markers": "python_version >= '3.7'",
+            "version": "==60.5.0"
+        },
         "six": {
             "hashes": [
                 "sha256:1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926",
                 "sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.16.0"
         },
         "terminado": {
@@ -564,6 +668,7 @@
                 "sha256:09fdde344324a1c9c6e610ee4ca165c4bb7f5bbf982fceeeb38998a988ef8452",
                 "sha256:b20fd93cc57c1678c799799d117874367cc07a3d2d55be95205b1a88fa08393f"
             ],
+            "markers": "python_version >= '3.6'",
             "version": "==0.12.1"
         },
         "testpath": {
@@ -571,6 +676,7 @@
                 "sha256:1acf7a0bcd3004ae8357409fc33751e16d37ccc650921da1094a86581ad1e417",
                 "sha256:8044f9a0bab6567fc644a3593164e872543bb44225b0e24846e2c89237937589"
             ],
+            "markers": "python_version >= '3.5'",
             "version": "==0.5.0"
         },
         "tornado": {
@@ -617,25 +723,24 @@
                 "sha256:fa2ba70284fa42c2a5ecb35e322e68823288a4251f9ba9cc77be04ae15eada68",
                 "sha256:fba85b6cd9c39be262fcd23865652920832b61583de2a2ca907dbd8e8a8c81e5"
             ],
+            "markers": "python_version >= '3.5'",
             "version": "==6.1"
         },
         "traitlets": {
             "hashes": [
-                "sha256:70b4c6a1d9019d7b4f6846832288f86998aa3b9207c6821f3578a6a6a467fe44",
-                "sha256:d023ee369ddd2763310e4c3eae1ff649689440d4ae59d7485eb4cfbbe3e359f7"
+                "sha256:059f456c5a7c1c82b98c2e8c799f39c9b8128f6d0d46941ee118daace9eb70c7",
+                "sha256:2d313cc50a42cd6c277e7d7dc8d4d7fedd06a2c215f78766ae7b1a66277e0033"
             ],
-            "index": "pypi",
-            "version": "==4.3.3"
+            "markers": "python_version >= '3.7'",
+            "version": "==5.1.1"
         },
         "typing-extensions": {
             "hashes": [
-                "sha256:49f75d16ff11f1cd258e1b988ccff82a3ca5570217d7ad8c5f48205dd99a677e",
-                "sha256:d8226d10bc02a29bcc81df19a26e56a9647f8b0a6d4a83924139f4a8b01f17b7",
-                "sha256:f1d25edafde516b146ecd0613dabcc61409817af4766fbbcfb8d1ad4ec441a34"
+                "sha256:4ca091dea149f945ec56afb48dae714f21e8692ef22a395223bcd328961b6a0e",
+                "sha256:7f001e5ac290a0c0401508864c7ec868be4e701886d5b573a9528ed3973d9d3b"
             ],
             "index": "pypi",
-            "markers": "python_version <= '3.7'",
-            "version": "==3.10.0.2"
+            "version": "==4.0.1"
         },
         "wcwidth": {
             "hashes": [
@@ -653,10 +758,11 @@
         },
         "zipp": {
             "hashes": [
-                "sha256:71c644c5369f4a6e07636f0aa966270449561fcea2e3d6747b8d23efaa9d7832",
-                "sha256:9fe5ea21568a0a70e50f273397638d39b03353731e6cbbb3fd8502a33fec40bc"
+                "sha256:9f50f446828eb9d45b267433fd3e9da8d801f614129124863f9c51ebceafb87d",
+                "sha256:b47250dd24f92b7dd6a0a8fc5244da14608f3ca90a5efcd37a3b1642fac9a375"
             ],
-            "version": "==3.6.0"
+            "markers": "python_version <= '3.8'",
+            "version": "==3.7.0"
         }
     },
     "develop": {}

freesurfer_surface/__init__.py

@@ -145,7 +145,7 @@ class PolygonalCircuit:
 
     def _normalize(self) -> PolygonalCircuit:
         vertex_indices = collections.deque(self.vertex_indices)
-        vertex_indices.rotate(-numpy.argmin(self.vertex_indices))
+        vertex_indices.rotate(int(-numpy.argmin(self.vertex_indices)))
         if len(vertex_indices) > 2 and vertex_indices[-1] < vertex_indices[1]:
             vertex_indices.reverse()
             vertex_indices.rotate(1)
@@ -664,7 +664,7 @@ class Surface:
         return vertex_indices
 
     def remove_unused_vertices(self) -> None:
-        vertex_index_conversion = [0] * len(self.vertices)
+        vertex_index_conversion = numpy.zeros(len(self.vertices), dtype=int)
         for vertex_index in sorted(self._unused_vertices(), reverse=True):
             del self.vertices[vertex_index]
             vertex_index_conversion[vertex_index] -= 1

setup.py

@@ -59,6 +59,7 @@ setuptools.setup(
         "Programming Language :: Python :: 3.7",
         "Programming Language :: Python :: 3.8",
         "Programming Language :: Python :: 3.9",
+        "Programming Language :: Python :: 3.10",
         "Topic :: Scientific/Engineering :: Information Analysis",
         "Topic :: Scientific/Engineering :: Medical Science Apps.",
         "Topic :: Utilities",