Home Explore Help
Sign In
fphammerle
/
freesurfer-stats
mirror of https://github.com/fphammerle/freesurfer-stats
1
0
Fork 0
Files Issues 0 Wiki
Tree: a6925fdb7d
Branches Tags
freesurfer-stat...
/
tests
/
subjects
/
soichi
/
stats
/
rh.aparc.a2009s.stats

rh.aparc.a2009s.stats 11 KB
History Raw

123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135 
  1. # Table of FreeSurfer cortical parcellation anatomical statistics 
    2. 

  2. # 
    3. 

  3. # CreationTime 2020/05/04-22:20:40-GMT
    4. 

  4. # generating_program mris_anatomical_stats
    5. 

  5. # cvs_version 7.0.0
    6. 

  6. # mrisurf.c-cvs_version 7.0.0
    7. 

  7. # cmdline mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.a2009s.stats -b -a ../label/rh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab output rh white 
    8. 

  8. # sysname  Linux
    9. 

  9. # hostname nid00762
    10. 

  10. # machine  x86_64
    11. 

  11. # user     hayashis
    12. 

  12. # 
    13. 

  13. # SUBJECTS_DIR /N/dc2/scratch/hayashis/bigred3-workflows/5eb0689676c10ead933d673c/5eb068b076c10e7b013d673f
    14. 

  14. # anatomy_type surface
    15. 

  15. # subjectname output
    16. 

  16. # hemi rh
    17. 

  17. # AnnotationFile ../label/rh.aparc.a2009s.annot
    18. 

  18. # AnnotationFileTimeStamp 2020/05/04 22:13:27
    19. 

  19. # Measure Cortex, NumVert, Number of Vertices, 115827, unitless
    20. 

  20. # Measure Cortex, WhiteSurfArea, White Surface Total Area, 83579.2, mm^2
    21. 

  21. # Measure Cortex, MeanThickness, Mean Thickness, 2.35815, mm
    22. 

  22. # BrainVolStatsFixed-NotNeeded because voxelvolume=1mm3
    23. 

  23. # Measure BrainSeg, BrainSegVol, Brain Segmentation Volume, 1169408.000000, mm^3
    24. 

  24. # Measure BrainSegNotVent, BrainSegVolNotVent, Brain Segmentation Volume Without Ventricles, 1157593.000000, mm^3
    25. 

  25. # Measure BrainSegNotVentSurf, BrainSegVolNotVentSurf, Brain Segmentation Volume Without Ventricles from Surf, 1157593.000000, mm^3
    26. 

  26. # Measure Cortex, CortexVol, Total cortical gray matter volume, 454587.696158, mm^3
    27. 

  27. # Measure SupraTentorial, SupraTentorialVol, Supratentorial volume, 1023873.000000, mm^3
    28. 

  28. # Measure SupraTentorialNotVent, SupraTentorialVolNotVent, Supratentorial volume, 1012058.000000, mm^3
    29. 

  29. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1420434.160521, mm^3
    30. 

  30. # NTableCols 10
    31. 

  31. # TableCol  1 ColHeader StructName
    32. 

  32. # TableCol  1 FieldName Structure Name
    33. 

  33. # TableCol  1 Units     NA
    34. 

  34. # TableCol  2 ColHeader NumVert
    35. 

  35. # TableCol  2 FieldName Number of Vertices
    36. 

  36. # TableCol  2 Units     unitless
    37. 

  37. # TableCol  3 ColHeader SurfArea
    38. 

  38. # TableCol  3 FieldName Surface Area
    39. 

  39. # TableCol  3 Units     mm^2
    40. 

  40. # TableCol  4 ColHeader GrayVol
    41. 

  41. # TableCol  4 FieldName Gray Matter Volume
    42. 

  42. # TableCol  4 Units     mm^3
    43. 

  43. # TableCol  5 ColHeader ThickAvg 
    44. 

  44. # TableCol  5 FieldName Average Thickness
    45. 

  45. # TableCol  5 Units     mm
    46. 

  46. # TableCol  6 ColHeader ThickStd
    47. 

  47. # TableCol  6 FieldName Thickness StdDev
    48. 

  48. # TableCol  6 Units     mm 
    49. 

  49. # TableCol  7 ColHeader MeanCurv
    50. 

  50. # TableCol  7 FieldName Integrated Rectified Mean Curvature
    51. 

  51. # TableCol  7 Units     mm^-1
    52. 

  52. # TableCol  8 ColHeader GausCurv 
    53. 

  53. # TableCol  8 FieldName Integrated Rectified Gaussian Curvature
    54. 

  54. # TableCol  8 Units     mm^-2
    55. 

  55. # TableCol  9 ColHeader  FoldInd
    56. 

  56. # TableCol  9 FieldName  Folding Index 
    57. 

  57. # TableCol  9 Units      unitless 
    58. 

  58. # TableCol 10 ColHeader CurvInd
    59. 

  59. # TableCol 10 FieldName Intrinsic Curvature Index
    60. 

  60. # TableCol 10 Units     unitless
    61. 

  61. # ColHeaders StructName NumVert SurfArea GrayVol ThickAvg ThickStd MeanCurv GausCurv FoldInd CurvInd
    62. 

  62. G_and_S_frontomargin                      629    550   2032  2.720 0.788     0.166     0.052       10     1.2
    63. 

  63. G_and_S_occipital_inf                     975    763   2163  2.444 0.589     0.147     0.038       11     1.6
    64. 

  64. G_and_S_paracentral                      1394    835   2680  2.611 0.745     0.105     0.027       10     1.6
    65. 

  65. G_and_S_subcentral                       1536   1152   3299  2.443 0.554     0.140     0.036       18     2.2
    66. 

  66. G_and_S_transv_frontopol                  907    800   3069  2.782 0.672     0.193     0.063       18     2.5
    67. 

  67. G_and_S_cingul-Ant                       2731   1859   6291  2.725 0.893     0.112     0.028       23     3.2
    68. 

  68. G_and_S_cingul-Mid-Ant                   1359    929   2537  2.656 0.499     0.102     0.019       10     1.1
    69. 

  69. G_and_S_cingul-Mid-Post                  1384    950   2911  2.832 0.695     0.109     0.025       11     1.5
    70. 

  70. G_cingul-Post-dorsal                      662    483   1901  3.144 0.686     0.161     0.042       10     1.3
    71. 

  71. G_cingul-Post-ventral                     338    253    730  2.246 0.712     0.181     0.073        9     1.2
    72. 

  72. G_cuneus                                 2360   1719   3295  1.787 0.385     0.154     0.039       30     3.8
    73. 

  73. G_front_inf-Opercular                    1288   1002   3363  2.629 0.623     0.145     0.036       19     2.0
    74. 

  74. G_front_inf-Orbital                       548    444   1617  2.530 0.595     0.175     0.058        9     1.3
    75. 

  75. G_front_inf-Triangul                      771    670   2513  2.796 0.701     0.164     0.053       13     1.8
    76. 

  76. G_front_middle                           3623   2949   9520  2.452 0.717     0.160     0.042       58     6.9
    77. 

  77. G_front_sup                              6327   4406  17517  3.122 0.624     0.136     0.034       67     9.0
    78. 

  78. G_Ins_lg_and_S_cent_ins                   714    477   1398  2.746 1.082     0.146     0.052       12     1.6
    79. 

  79. G_insular_short                           595    401   1739  3.161 1.031     0.130     0.047        8     1.1
    80. 

  80. G_occipital_middle                       2030   1581   4875  2.546 0.608     0.167     0.043       34     3.8
    81. 

  81. G_occipital_sup                          1466   1057   2700  2.140 0.524     0.144     0.032       17     2.1
    82. 

  82. G_oc-temp_lat-fusifor                    1279    953   3135  2.478 0.552     0.147     0.038       17     2.2
    83. 

  83. G_oc-temp_med-Lingual                    2940   2228   5472  2.122 0.648     0.159     0.045       43     5.9
    84. 

  84. G_oc-temp_med-Parahip                     821    524   2280  2.927 0.780     0.103     0.029        7     0.7
    85. 

  85. G_orbital                                2675   2119   6867  2.502 0.847     0.177     0.059       63     7.1
    86. 

  86. G_pariet_inf-Angular                     2301   1811   4843  2.130 0.585     0.148     0.034       31     3.3
    87. 

  87. G_pariet_inf-Supramar                    2075   1709   4618  2.202 0.652     0.165     0.050       37     4.5
    88. 

  88. G_parietal_sup                           2717   1947   4965  2.067 0.610     0.134     0.026       28     3.0
    89. 

  89. G_postcentral                            2073   1497   3549  1.916 0.506     0.131     0.031       21     2.8
    90. 

  90. G_precentral                             2797   1781   6049  2.649 0.595     0.123     0.032       25     4.0
    91. 

  91. G_precuneus                              2313   1694   5233  2.406 0.672     0.143     0.032       29     3.2
    92. 

  92. G_rectus                                  948    760   2740  2.630 0.712     0.155     0.044       21     1.8
    93. 

  93. G_subcallosal                             685    535    979  2.077 0.700     0.185     0.072       12     2.1
    94. 

  94. G_temp_sup-G_T_transv                     603    467   1222  2.197 0.633     0.201     0.072       16     1.7
    95. 

  95. G_temp_sup-Lateral                       1781   1529   4792  2.337 0.686     0.161     0.052       36     4.4
    96. 

  96. G_temp_sup-Plan_polar                     802    581   1895  2.726 0.885     0.127     0.040       11     1.5
    97. 

  97. G_temp_sup-Plan_tempo                     578    403   1007  2.117 0.629     0.082     0.013        2     0.3
    98. 

  98. G_temporal_inf                           1580   1279   4413  2.583 0.769     0.163     0.049       26     3.4
    99. 

  99. G_temporal_middle                        1976   1710   5103  2.266 0.681     0.154     0.045       34     3.9
    100. 

  100. Lat_Fis-ant-Horizont                      319    217    386  1.988 0.557     0.105     0.016        2     0.2
    101. 

  101. Lat_Fis-ant-Vertical                      177    129    213  1.875 0.358     0.124     0.018        1     0.2
    102. 

  102. Lat_Fis-post                             1227    817   1648  2.563 0.494     0.117     0.025        9     1.2
    103. 

  103. Pole_occipital                           3047   2381   5167  1.959 0.578     0.168     0.049       47     6.1
    104. 

  104. Pole_temporal                            1440   1201   4468  2.576 0.793     0.151     0.039       20     2.7
    105. 

  105. S_calcarine                              2581   1785   2885  1.866 0.508     0.127     0.031       24     3.4
    106. 

  106. S_central                                2964   1946   3125  1.884 0.509     0.100     0.019       16     2.3
    107. 

  107. S_cingul-Marginalis                      1226    813   1665  2.153 0.464     0.094     0.016        6     0.8
    108. 

  108. S_circular_insula_ant                     660    430    858  2.313 0.536     0.092     0.016        3     0.4
    109. 

  109. S_circular_insula_inf                    1152    748   1588  2.442 0.598     0.087     0.016        5     0.8
    110. 

  110. S_circular_insula_sup                    1511    979   2335  2.805 0.582     0.095     0.017        6     1.1
    111. 

  111. S_collat_transv_ant                       851    583   1368  2.173 0.754     0.117     0.021        7     0.8
    112. 

  112. S_collat_transv_post                      483    348    522  1.976 0.330     0.177     0.045        7     1.0
    113. 

  113. S_front_inf                              2322   1663   3565  2.237 0.503     0.122     0.027       19     2.7
    114. 

  114. S_front_middle                           1753   1214   2706  2.160 0.713     0.110     0.025       11     1.6
    115. 

  115. S_front_sup                              2220   1502   3444  2.387 0.575     0.097     0.018       11     1.7
    116. 

  116. S_interm_prim-Jensen                      397    267    468  1.748 0.455     0.092     0.018        2     0.3
    117. 

  117. S_intrapariet_and_P_trans                3081   2116   3751  1.948 0.427     0.119     0.023       27     2.9
    118. 

  118. S_oc_middle_and_Lunatus                   782    526   1052  2.154 0.493     0.129     0.027        7     0.8
    119. 

  119. S_oc_sup_and_transversal                 1313    891   1634  1.980 0.471     0.120     0.025       11     1.4
    120. 

  120. S_occipital_ant                           669    492    999  1.938 0.378     0.141     0.037        7     0.9
    121. 

  121. S_oc-temp_lat                             711    525   1197  2.072 0.609     0.145     0.037        8     1.2
    122. 

  122. S_oc-temp_med_and_Lingual                2057   1356   2710  2.162 0.549     0.101     0.019       11     1.6
    123. 

  123. S_orbital_lateral                         432    311    646  2.495 0.537     0.117     0.022        2     0.4
    124. 

  124. S_orbital_med-olfact                      800    521    983  2.194 0.641     0.101     0.017        5     0.5
    125. 

  125. S_orbital-H_Shaped                       1225    847   2242  2.643 0.661     0.121     0.028       11     1.3
    126. 

  126. S_parieto_occipital                      2522   1683   3592  2.339 0.553     0.113     0.020       18     2.2
    127. 

  127. S_pericallosal                           1418    958   1775  2.447 0.776     0.139     0.024       18     1.2
    128. 

  128. S_postcentral                            2559   1646   2879  1.974 0.442     0.098     0.016       14     1.8
    129. 

  129. S_precentral-inf-part                    2059   1380   3182  2.512 0.517     0.111     0.020       13     1.7
    130. 

  130. S_precentral-sup-part                    1436    926   1955  2.391 0.480     0.100     0.020        8     1.2
    131. 

  131. S_suborbital                              317    207    701  3.280 0.981     0.089     0.011        1     0.2
    132. 

  132. S_subparietal                            1160    797   1867  2.508 0.601     0.110     0.024        8     1.0
    133. 

  133. S_temporal_inf                            524    383    772  1.917 0.532     0.125     0.029        4     0.6
    134. 

  134. S_temporal_sup                           5607   4002   8766  2.175 0.556     0.117     0.025       51     5.8
    135. 

  135. S_temporal_transverse                     244    180    338  2.240 0.270     0.135     0.019        2     0.2
    136.