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freesurfer-stats
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rh.w-g.pct.stats

rh.w-g.pct.stats 6.6 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version 7.0.0
    5. 

  5. # cmdline mri_segstats --in /N/dc2/scratch/hayashis/bigred3-workflows/5eb0689676c10ead933d673c/5eb068b076c10e7b013d673f/output/surf/rh.w-g.pct.mgh --annot output rh aparc --sum /N/dc2/scratch/hayashis/bigred3-workflows/5eb0689676c10ead933d673c/5eb068b076c10e7b013d673f/output/stats/rh.w-g.pct.stats --snr 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname nid00762
    8. 

  8. # machine  x86_64
    9. 

  9. # user     hayashis
    10. 

  10. # anatomy_type surface
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /N/dc2/scratch/hayashis/bigred3-workflows/5eb0689676c10ead933d673c/5eb068b076c10e7b013d673f
    13. 

  13. # subjectname output
    14. 

  14. # Annot output rh aparc
    15. 

  15. # ColorTable /tmp/mri_segstats.tmp.output.rh.176.ctab 
    16. 

  16. # ColorTableTimeStamp 2020/05/04 22:13:42 
    17. 

  17. # InVolFile  /N/dc2/scratch/hayashis/bigred3-workflows/5eb0689676c10ead933d673c/5eb068b076c10e7b013d673f/output/surf/rh.w-g.pct.mgh 
    18. 

  18. # InVolFileTimeStamp  2020/05/04 22:13:41 
    19. 

  19. # InVolFrame 0 
    20. 

  20. # Only reporting non-empty segmentations
    21. 

  21. # VertexArea_mm2 0.713817 
    22. 

  22. # TableCol  1 ColHeader Index 
    23. 

  23. # TableCol  1 FieldName Index 
    24. 

  24. # TableCol  1 Units     NA 
    25. 

  25. # TableCol  2 ColHeader SegId 
    26. 

  26. # TableCol  2 FieldName Segmentation Id
    27. 

  27. # TableCol  2 Units     NA
    28. 

  28. # TableCol  3 ColHeader NVertices 
    29. 

  29. # TableCol  3 FieldName Number of Vertices
    30. 

  30. # TableCol  3 Units     unitless
    31. 

  31. # TableCol  4 ColHeader Area_mm2
    32. 

  32. # TableCol  4 FieldName Area
    33. 

  33. # TableCol  4 Units     mm^2
    34. 

  34. # TableCol  5 ColHeader StructName
    35. 

  35. # TableCol  5 FieldName Structure Name
    36. 

  36. # TableCol  5 Units     NA
    37. 

  37. # TableCol  6 ColHeader Mean 
    38. 

  38. # TableCol  6 FieldName Intensity Mean
    39. 

  39. # TableCol  6 Units     unknown
    40. 

  40. # TableCol  7 ColHeader StdDev
    41. 

  41. # TableCol  7 FieldName Itensity StdDev
    42. 

  42. # TableCol  7 Units     unknown
    43. 

  43. # TableCol  8 ColHeader Min
    44. 

  44. # TableCol  8 FieldName Intensity Min
    45. 

  45. # TableCol  8 Units     unknown
    46. 

  46. # TableCol  9 ColHeader Max
    47. 

  47. # TableCol  9 FieldName Intensity Max
    48. 

  48. # TableCol  9 Units     unknown
    49. 

  49. # TableCol 10 ColHeader Range
    50. 

  50. # TableCol 10 FieldName Intensity Range
    51. 

  51. # TableCol 10 Units     unknown
    52. 

  52. # TableCol 11 ColHeader SNR
    53. 

  53. # TableCol 11 FieldName Intensity SNR
    54. 

  54. # TableCol 11 Units     none
    55. 

  55. # NRows 35 
    56. 

  56. # NTableCols 11 
    57. 

  57. # ColHeaders  Index SegId NVertices Area_mm2 StructName Mean StdDev Min Max Range SNR  
    58. 

  58.   1 2000      8853     5420.3  unknown                            0.0000     0.0000     0.0000     0.0000     0.0000       -nan 
    59. 

  59.   2 2001      1094      756.7  bankssts                          31.2677     7.1936    -1.4849    50.0722    51.5571     4.3466 
    60. 

  60.   3 2002      1137      779.6  caudalanteriorcingulate           30.7286     7.7858     7.1339    50.1157    42.9818     3.9468 
    61. 

  61.   4 2003      3126     2217.6  caudalmiddlefrontal               29.0918     6.1220     3.0490    48.5092    45.4603     4.7520 
    62. 

  62.   5 2005      2446     1781.0  cuneus                            24.3815     5.9971     3.7057    41.9099    38.2042     4.0655 
    63. 

  63.   6 2006       448      310.1  entorhinal                        29.2989     7.7223    -3.7783    54.4055    58.1838     3.7941 
    64. 

  64.   7 2007      3194     2329.9  fusiform                          28.7824     7.7527    -9.2600    52.1709    61.4310     3.7126 
    65. 

  65.   8 2008      7290     5466.7  inferiorparietal                  29.2785     7.0142   -26.9370    57.2965    84.2335     4.1742 
    66. 

  66.   9 2009      2872     2202.8  inferiortemporal                  30.1240     8.4380     0.6067    55.0641    54.4574     3.5700 
    67. 

  67.  10 2010      1455     1084.6  isthmuscingulate                  24.6425     8.0622    -6.1244    56.7026    62.8269     3.0566 
    68. 

  68.  11 2011      6205     4673.5  lateraloccipital                  26.6143     7.6781    -9.8784    56.7037    66.5822     3.4663 
    69. 

  69.  12 2012      3755     2748.3  lateralorbitofrontal              28.4431    11.1385   -52.8371    74.9205   127.7576     2.5536 
    70. 

  70.  13 2013      4863     3579.3  lingual                           23.9671     8.3827   -57.4021    45.5011   102.9032     2.8591 
    71. 

  71.  14 2014      3103     2244.0  medialorbitofrontal               28.9179    11.5042   -56.8839    54.1360   111.0199     2.5137 
    72. 

  72.  15 2015      3518     2820.8  middletemporal                    27.5033     7.7895    -9.8213    54.8879    64.7092     3.5308 
    73. 

  73.  16 2016       888      571.8  parahippocampal                   30.4945     7.8268    -1.3078    63.7504    65.0582     3.8961 
    74. 

  74.  17 2017      2315     1388.4  paracentral                       24.0975     8.5854    -0.1541    42.9093    43.0634     2.8068 
    75. 

  75.  18 2018      2127     1536.2  parsopercularis                   30.6128     7.3398   -10.2121    53.0001    63.2122     4.1708 
    76. 

  76.  19 2019      1076      832.6  parsorbitalis                     28.4238     7.5325     2.9583    51.4170    48.4587     3.7735 
    77. 

  77.  20 2020      2087     1627.5  parstriangularis                  28.4401     7.1978     1.5305    54.2725    52.7420     3.9512 
    78. 

  78.  21 2021      2258     1599.5  pericalcarine                     22.1914     5.8634    -0.6005    38.1512    38.7517     3.7847 
    79. 

  79.  22 2022      5861     4069.8  postcentral                       26.5326     6.3235    -6.1775    52.9131    59.0906     4.1959 
    80. 

  80.  23 2023      1769     1269.1  posteriorcingulate                29.5282     9.0183     4.1041    56.4376    52.3334     3.2743 
    81. 

  81.  24 2024      7650     5005.2  precentral                        24.8604     7.6613    -9.0372    56.5383    65.5754     3.2449 
    82. 

  82.  25 2025      5751     3949.9  precuneus                         29.1653     6.5867     2.7738    56.3786    53.6048     4.4279 
    83. 

  83.  26 2026       827      643.2  rostralanteriorcingulate          28.5428     7.9780     5.7940    59.9231    54.1290     3.5777 
    84. 

  84.  27 2027      7032     5486.2  rostralmiddlefrontal              28.8678     7.3535    -8.7395    50.9992    59.7387     3.9257 
    85. 

  85.  28 2028      9449     6511.7  superiorfrontal                   30.5148     6.8143     3.1892    55.3544    52.1653     4.4780 
    86. 

  86.  29 2029      7647     5341.8  superiorparietal                  28.2989     5.9352    -4.5147    47.7949    52.3096     4.7680 
    87. 

  87.  30 2030      5052     3777.7  superiortemporal                  29.3703     8.2497   -56.9813    64.5267   121.5080     3.5602 
    88. 

  88.  31 2031      4621     3486.1  supramarginal                     29.2036     7.8452   -28.3112    53.0074    81.3186     3.7225 
    89. 

  89.  32 2032       372      341.7  frontalpole                       29.1104     8.2514     9.4101    49.6567    40.2466     3.5279 
    90. 

  90.  33 2033       582      460.2  temporalpole                      27.7395     9.2680   -12.6508    54.7236    67.3745     2.9930 
    91. 

  91.  34 2034       538      427.5  transversetemporal                22.7135     9.2696   -37.0885    53.3634    90.4520     2.4503 
    92. 

  92.  35 2035      3419     2257.4  insula                            25.0075    14.1123   -69.1953    96.5754   165.7708     1.7720 
    93.