import datetime import os from conftest import SUBJECTS_DIR from freesurfer_stats import CorticalParcellationStats def test_read_dktatlas(): stats = CorticalParcellationStats.read(os.path.join( SUBJECTS_DIR, 'fabian', 'stats', 'lh.aparc.DKTatlas.stats')) assert stats.creation_time == datetime.datetime( 2019, 5, 9, 21, 5, 54, tzinfo=datetime.timezone.utc) assert stats.generating_program == 'mris_anatomical_stats' assert stats.cvs_version == 'Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp' assert stats.mrisurf_ccvs_version \ == 'Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp' assert stats.cmdline == 'mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label' \ ' -f ../stats/lh.aparc.DKTatlas.stats -b -a ../label/lh.aparc.DKTatlas.annot' \ ' -c ../label/aparc.annot.DKTatlas.ctab fabian lh white' assert stats.sysname == 'Linux' assert stats.hostname == 'another-hostname' assert stats.machine == 'x86_64' assert stats.user == 'some-username' def test_read_pial(): stats = CorticalParcellationStats.read(os.path.join( SUBJECTS_DIR, 'fabian', 'stats', 'rh.aparc.pial.stats')) assert stats.creation_time == datetime.datetime( 2019, 5, 9, 21, 3, 42, tzinfo=datetime.timezone.utc) assert stats.generating_program == 'mris_anatomical_stats' assert stats.cvs_version == 'Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp' assert stats.mrisurf_ccvs_version \ == 'Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp' assert stats.cmdline == 'mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label' \ ' -f ../stats/rh.aparc.pial.stats -b -a ../label/rh.aparc.annot' \ ' -c ../label/aparc.annot.ctab fabian rh pial' assert stats.sysname == 'Linux' assert stats.hostname == 'some-hostname' assert stats.machine == 'x86_64' assert stats.user == 'some-username'